hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/meh/meh02020/w3open/interpro/cnk_1/seq.in
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Query:  mKIAA1137  ( 923 res)   meh02020

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Hydrolase haloacid dehalogenase-like hydrolase           17.1      0.015   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Hydrolase   1/1     119   568 ..     1   183 []    17.1    0.015

Alignments of top-scoring domains:
Hydrolase: domain 1 of 1, from 119 to 568: score 17.1, E = 0.015
                   *->ikavvFDkDGTLtdgk...............................
                      +  ++ Dk+GTLt+     ++ + ++++ ++  +  +++ + +++++
   mKIAA1137   119    VEYIFSDKTGTLTQNImvfnkcsinghsygdvfdvlghkaelgerpe 165  

                   ..................................................
                   + + + ++  +++    +++  +  + +++++++  +  +  ++  ++++
   mKIAA1137   166 pvdfsfnpladkkflfwdsslleavkmgdphtheffrllslchtvmseek 215  

                   .........eppiaeaiveaaaelgl.........lpleevekllgrgl.
                   ++++   + + p + a+v aa+++g   +++++++++++e+  ++  +l 
   mKIAA1137   216 negelyykaQSPDEGALVTAARNFGFvfrsrtpktITVHELGTAITYQLl 265  

                   gerilleggltaell...................................
                   +  il++ +++ ++    ++++++ +   ++ ++   ++ ++++ +  ++
   mKIAA1137   266 A--ILDFNNIRKRMSvivrnpegkirlyckgadtilldrlhpptqellss 313  

                   ..................................................
                   ++++ ++  +++ ++     ++ +++  ++  +++   +   ++++++  
   mKIAA1137   314 ttdhlneyagdglrtlvlaykdldeeyyeewarrrlqaslaqdsredrla 363  

                   ........d.evlglial.dklypgarealkaLkerGikvailTggdr.n
                   +  ++ ++d  +lg+ a +dkl  g++e+++ L  ++ik+++lTg+ +++
   mKIAA1137   364 siyeevesDmMLLGATAIeDKLQQGVPETIALLTLANIKIWVLTGDKQeT 413  

                   aealle....algla.lfdvivdsddvggvgpivvgKPkpeifllalerl
                   a+ ++ + + +++ +    ++v+++ v+            e +++a++++
   mKIAA1137   414 AVNIGYsckmLTD-DmTEVFVVTGHTVL---------EVREELRKARKKM 453  

                   gvkpeevg..........................................
                     + ++vg++ + +++ ++++ ++  +   ++     ++++  +  + + 
   mKIAA1137   454 VDSSHAVGngftyqgnlssskltsvleavageyalvinghslahaleadm 503  

                   ...................................pe.vlmvGDgvnDap
                   + +  ++    +     + ++ ++ +  +  ++ +   +l++GDg nD+ 
   mKIAA1137   504 elefletacackaviccrvtplqkaqvvelvkkykKAvTLAIGDGANDVS 553  

                   alaaAGvgvamgngg<-*
                   +++ A++gv +       
   mKIAA1137   554 MIKTAHIGVGISGQE    568  

//