hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mth/mth00654/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1131  ( 1571 res)   mth00654

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HECTc    Domain Homologous to E6-AP Carboxyl Terminus   266.3    2.4e-75   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HECTc      1/1    1104  1571 .]     1   407 []   266.3  2.4e-75

Alignments of top-scoring domains:
HECTc: domain 1 of 1, from 1104 to 1571: score 266.3, E = 2.4e-75
                   *->nsspddLkkrske..aLeIefvvnehgvgEeglDgGGvtrEFfflls
                      +  ++ ++ +++++++Le+ef       gEeg +g+G+t+EF++l+ 
   mKIAA1131  1104    EWAENVMQIHADRksVLEVEF------LGEEG-TGLGPTLEFYALVA 1143 

                   kelfnptdygLFryspn.....dnae.k..s.kti.YigrlrylLfpnPs
                    e+++  d+g + +++n +++++++ + +++ k+ +Y++ +  +Lf  P+
   mKIAA1131  1144 AEFQRT-DLGTWLCDDNfpddeSRHVdLggGlKPPgYYVQRSCGLFTAPF 1192 

                   agfaneehlaavyFrfiGrvlGkAlyenrllDlrFarpFyKkLLgkpk..
                   ++ ++e++++  +F+f+G++l+k++ +nrl+Dl+ ++pF+K ++   +++
   mKIAA1131  1193 PQDSDELERITKLFHFLGIFLAKCIQDNRLVDLPISKPFFKLMCMGDIks 1242 

                   ..................................................
                   + ++   +++++++ + ++++++ ++++++++ + ++ +++++++   ++
   mKIAA1131  1243 nmskliyesrgdrdlhctesqseasteeghdslsvgsfeedsksefildp 1292 

                   .........gtdvtlhDleslDPelyksLvwLi.lvrrKleleeDlsees
                   ++++++   + ++t++D+e ++P+  ++L+++ +l+ + +++   +s   
   mKIAA1131  1293 pkpkppawfNGILTWEDFELVNPHRARFLKEIKdLAIKRRQILGNKSLSE 1342 

                   kslenditevel.............dmaLtFsivlesdfgevkvvELkpG
                    +++  + e++l+++++++++ + +d+ L+F+ +  s   +++ v+Lkp 
   mKIAA1131  1343 DEKNTKLQELVLrnpsgsgpplsieDLGLNFQFCPSSRIYGFTAVDLKPS 1392 

                   GsnipVTeeNkkEYVhlvieyrlnkgvekqleAFreGFseVipeelLryl
                   G++ ++T +N +EYV+l+ ++ + +g++kq+eAFr+GF++V+p e L+  
   mKIAA1131  1393 GEDEMITMDNAEEYVDLMFDFCMHTGIQKQMEAFRDGFNKVFPMEKLS-S 1441 

                   FdeeELeLLicGle.eeidvddLksnTeyrggYtensqtirfkkwFWevv
                   F  eE ++++cG++++ + ++d +++Te++ gYt++s+ +     F +v+
   mKIAA1131  1442 FSHEEVQMILCGNQsPSWAAEDIINYTEPKLGYTRDSPGF---LRFVRVL 1488 

                   esFtneerrkLLqFVTGssrlPASvgGFaaLspsNGpqkFtIrkagsetl
                     ++  er+ +LqF+TG+s lP  +gG+a+L+p     ++t++++     
   mKIAA1131  1489 CGMSSDERKAFLQFTTGCSTLP--PGGLANLHP-----RLTVVRKVD--- 1528 

                   sdddrLPtAhTCfNrLkLPpYsSkeiLreKLLlAInegRiggeGFgls<-
                     d ++P+++TC+++LkLP+YsS ei+re+LL A +e     +GF+l+  
   mKIAA1131  1529 ATDASYPSVNTCVHYLKLPEYSSEEIMRERLLAATME-----KGFHLN   1571 

                   *
                    
   mKIAA1131     -   -    

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