hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj06002/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1130  ( 655 res)   mfj06002

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Glycos_transf_2 Glycosyl transferase family 2            82.8    6.9e-21   1
Ricin_B_lectin  Ricin-type beta-trefoil lectin domain    78.6    1.3e-19   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Glycos_transf_2   1/1     223   405 ..     1   149 []    82.8  6.9e-21
Ricin_B_lectin    1/1     528   649 ..     1   141 []    78.6  1.3e-19

Alignments of top-scoring domains:
Glycos_transf_2: domain 1 of 1, from 223 to 405: score 82.8, E = 6.9e-21
                   *->SviiPtYNe.ekyleetleSllnQt.tyenfEiivvDDgStDgtvei
                      Svii ++Ne  ++l++t++S+ln t+     Eii+vDD S  + +e 
   mKIAA1130   223    SVIITFHNEaRSTLLRTVKSVLNRTpASLIQEIILVDDFS--SDPED 267  

                   aeeyakdprirvirleenlGlaaArNaGlkkAtGdydyiaflDaDdev.p
                   +  +   p+++ +r+++++Gl + r +G++ A     +++flD+++ev+ 
   mKIAA1130   268 CLLLTRIPKVKCLRNDKREGLIRSRVRGADVAGAT--VLTFLDSHCEVnV 315  

                   dwlekllellekngadivig.rv.in.e.n.kgr................
                   +wl+++l++  ++   +v + ++ i+ +++ +   + + +++ + + + +
   mKIAA1130   316 EWLQPMLQRVMEDHTRVVSPiIDvISlDnFaYLAasadlrggfdwslhfk 365  

                   .......llgk.l.l.l.l.v.fli.snalyrrealekll<-*
                    +  + + + ++++ ++++++++  ++ +++ ++++++l+   
   mKIAA1130   366 weqipleQKMTrTdPtKpIrTpVIAgGIFVIDKSWFNHLG    405  

Ricin_B_lectin: domain 1 of 1, from 528 to 649: score 78.6, E = 1.3e-19
                   *->asgeirnvgrasglCLDvpggntadggpvglypChg....gggndQl
                       +g+i++    +  CL+++g+nta    +g+  C g+ ++ +   Q 
   mKIAA1130   528    LPGVIKQ----GVNCLESQGQNTAGDLLLGMGICRGsaksPPPA-QA 569  

                   WfetltgdgeirsngnssllCLdvsggg.tadGskvvlwpCngg.gnQrW
                   W   ++++  i++ g+    CL++ +   +++Gs+v+l++Cn+ +g Q+W
   mKIAA1130   570 W--LFSDH-LIQQQGK----CLAATSTLmSSPGSPVILQTCNPKeGKQKW 612  

                   dydggngdgtirnrkdsglCLDvkggsangtkvilwktCdWkngsan.Qq
                   +++g     +i++ + sglCL++     + +++++  +C     +a  Qq
   mKIAA1130   613 RRKG----SFIQHSV-SGLCLET-----KPAQLVTS-KC---QTDAQaQQ 648  

                   W<-*
                   W   
   mKIAA1130   649 W    649  

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