hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06405/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1114  ( 1736 res)   mbg06405

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
MAGE     MAGE family                                    102.1    1.1e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
MAGE       1/1      66   379 ..     1   254 []   102.1  1.1e-26

Alignments of top-scoring domains:
MAGE: domain 1 of 1, from 66 to 379: score 102.1, E = 1.1e-26
                   *->rgQkSklckrEerlqargEtqglvgaQapaaeeqqeeasssspsqrP
                       + + ++ +     +++++t+        a+   q eass ++    
   mKIAA1114    66    ASNRQTDASNRQTEASSRQTE--------ASSR-QTEASSRQT---- 99   

                   vSsffSytlaLvlgtleevpaAggspspPqsPQgs...............
                                +  +e++aA+     P++P g +++++++++ +++++
   mKIAA1114   100 ----------EASSRQIEASAAAV---RPKKPRGKkgnnkgsnsasepse 136  

                   ..................................................
                    ++  ++ +++  + + + +++++ ++  ++++ ++++ +  +++ + ++
   mKIAA1114   137 appaiqtvtnhalsvtvrirrgsrarkaanknratesqaqiaeqgaqase 186  

                   ...........................asstitavaaktslsqSdEGssS
                    + +  +++     +   ++   + + +++t t           +  s++
   mKIAA1114   187 asisaletqvaaavqaladdylaqlslEPTTRTRGKR-------NRKSKH 229  

                   qvvLqeEEgpstSqaltsteslfk.....dpLtrKvaeLVqFLLrKYkmK
                   +    +EE       ++   + ++++++ + L + ++ LV +LL+K++ K
   mKIAA1114   230 P---NGEERTGNNYRRIPWGRRLPpprdvAILQERANKLVKYLLVKDQTK 276  

                   epvTKAEMLksViknYKdhFPeIFrKASerlelVFGidLKEVDPtgHsYv
                    p+ +++MLk Vi  Y+d+FPeI  +AS  le  F + LKE+D   + Y+
   mKIAA1114   277 IPIKRSDMLKDVIQEYEDYFPEIIERASYALEKMFRVNLKEIDKQNNLYI 326  

                   LVtkLgLsydGlLsdnqsmPktGLLiivLgvIFmkGncApEEeIWEfLsv
                   L+++   s+ G+ +   + Pk GLL+ +L+vIFm+Gn A+E +IWE+L++
   mKIAA1114   327 LISTQE-SSAGIMGTTKDTPKLGLLMVILSVIFMNGNKASEAVIWEVLRK 375  

                   lGvY<-*
                   lG+    
   mKIAA1114   376 LGLH    379  

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