hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg21942/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1112  ( 280 res)   mbg21942

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     63.4      3e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      90   198 ..     1    82 []    63.4    3e-14

Alignments of top-scoring domains:
PH: domain 1 of 1, from 90 to 198: score 63.4, E = 3e-14
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk.......kpkgs
                      +i++G L++ +++  + ++r f+Lf+++L+y+k++  +++   +kg+
   mKIAA1112    90    LIHSGELTRVTqpQaRSQQRMFFLFDRQLIYCKKDllrrdvlYYKGR 136  

                   ipLsgcsvre.p.............cFeivt.dr..tlllqAeseeeree
                   +++++++v++ +++++++ + + +++F++++++ ++++ll+A+ +e++++
   mKIAA1112   137 LDMDDLEVVDvEdgkdrdlhvsvknAFRLYCgTTgdSHLLCARKPEQKQR 186  

                   Wvealqsaiaka<-*
                   W++a+ +  ++    
   mKIAA1112   187 WLKAFAREREQV    198  

//