hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mph/mph01427/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1104  ( 1033 res)   mph01427

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
Peptidase_M16_C Peptidase M16 inactive domain           194.4    1.8e-54   2

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
Peptidase_M16_C   1/2     241   429 ..     1   198 []   126.2  5.9e-34
Peptidase_M16_C   2/2     757   955 ..     1   198 []    68.1  1.8e-16

Alignments of top-scoring domains:
Peptidase_M16_C: domain 1 of 2, from 241 to 429: score 126.2, E = 5.9e-34
                   *->sltredLkdFykkhYspdnmvlvvvGdvdhdellalae.kyfgdlpa
                       lt e+Lk+F+++hY+p+n+ ++ +G++ ++  l+++ +++++++++
   mKIAA1104   241    ELTWEQLKQFHATHYHPSNARFFTYGNFQLEGHLKQIHeEALSKFQR 287  

                   skekalvpplneAkgkpr.pprepakl.g.evvvp.kdvpqahlalafpg
                    ++++ vp     + +++++pre+  + g++    ++  +q+ ++++f++
   mKIAA1104   288 LEQSTAVP-----AQPHWdKPREFHITcGpDSLATeTA-KQTTVSVSFLL 331  

                   pplsddpdsaaldvLnelLggggggmsSrLfqelrekegLpaysvsafnd
                   p+++d+ ++++l++L++lL  g   ++S+++++l  ++gL ++++s ++ 
   mKIAA1104   332 PDITDTFEAFTLSLLSSLLIAG---PNSPFYKALI-ESGL-GTDFSPDVG 376  

                   sysynd.ddtGlfgiya.tdpegenleeRvlelileeleklaeeGiteee
                      yn  +   +f++++++ +e +++   v el+++++e+++e+G+ ++ 
   mKIAA1104   377 ---YNGyTREAYFSVGLqGIAE-KDVKT-VRELVDRTIEEVIEKGFEDDR 421  

                   leraknql<-*
                   +e++ + +   
   mKIAA1104   422 IEALLHKI    429  

Peptidase_M16_C: domain 2 of 2, from 757 to 955: score 68.1, E = 1.8e-16
                   *->sltredLkdFykkhYspdnmvlvvvGdvdhd..ellalaekyfgdlp
                       + + +L    k  ++ dnm ++v    + + +++++ +e ++  + 
   mKIAA1104   757    PI-LRKLPRIKKYLLNCDNMRCSVNA-TPQQmpQAEKEVENFLRNVG 801  

                   askekal.vppl.n...eA..........kgkpr.pprepakl.g.evvv
                   +sk++ ++v+p+ +++++++++++  + ++ ++ ++ ++++++++ +   
   mKIAA1104   802 RSKKERKpVRPHiVekpTPsgpsgaahvsGSQIVrKLVTDPTFkPcQMKT 851  

                   p.kdv.pqahlalafpgpplsddpdsaaldvLnelLggggggmsSrLfqe
                   +     p++++  + +++p+  dpd+a l++L++l+          L++e
   mKIAA1104   852 HfVLPfPVNYIGECVRTVPY-ADPDHASLKILARLMTAK------FLHTE 894  

                   lrekegLpaysvsafndsysyndddtGlfgiya.tdpegenleeRvleli
                   +r ++g+ ay+ +a ++       ++G+f++y+ +dp+     e +l+++
   mKIAA1104   895 IR-EKGG-AYGGGAKLT-------HSGIFTLYSyRDPN---SIE-TLQSF 931  

                   leeleklaeeGiteeeleraknql<-*
                    +++++ +++++t++++++ak  +   
   mKIAA1104   932 GKAVDWAKSGKFTQQDIDEAKLSV    955  

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