hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mbg/mbg09321/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA1092 ( 889 res) mbg09321 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PI-PLC-X Phosphatidylinositol-specific phospholipase 238.3 1.1e-67 1 PI-PLC-Y Phosphatidylinositol-specific phospholipase 169.9 4.2e-47 1 C2 C2 domain 87.7 2.3e-22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PI-PLC-X 1/1 189 333 .. 1 153 [] 238.3 1.1e-67 PI-PLC-Y 1/1 379 496 .. 1 128 [] 169.9 4.2e-47 C2 1/1 518 608 .. 1 88 [] 87.7 2.3e-22 Alignments of top-scoring domains: PI-PLC-X: domain 1 of 1, from 189 to 333: score 238.3, E = 1.1e-67 *->dmsiPLsHYfisSshntYLtgkQlwGkssvesYrqqLdaGcRcvELD dm +PLsHYfi+SshntYL +Q++G+s + +Y++ L++GcR vELD mKIAA1092 189 DMKQPLSHYFINSSHNTYLIEDQFRGPSDITGYIRALKMGCRSVELD 235 cwdGkpddepiIyHGhtltleiklkdVleaIkdfafkPtSpyPvIlSlen +wdG pd+ep+Iy+Ght+t++i + V++ I ++af +S+yP+Il len mKIAA1092 236 VWDG-PDNEPVIYTGHTMTSQIVFRSVIDIINKYAFF-ASEYPLILCLEN 283 HcnsddqQrkmakyfkeiFgdmLltkPtldslttepglpLPslkdlrgKI Hc+ qQ+ m++++k+i+gd+L+t t ++ ++ LPs++ l+gKI mKIAA1092 284 HCSIK-QQKVMVQHMKKILGDKLYT--TSPNMEES---YLPSPDVLKGKI 327 LLknkk<-* L+k kk mKIAA1092 328 LIKAKK 333 PI-PLC-Y: domain 1 of 1, from 379 to 496: score 169.9, E = 4.2e-47 *->ElsnLvnYiqsikFrsFelsGeekntsyeisSFsErkvkakkllkes Els+Lv ++s+ F+ F s + + + e+ SF+E a k+ e mKIAA1092 379 ELSELVSICKSVQFKEFQVS-FQVQKYWEVCSFNEV--LASKYANEN 422 pvefVkyNkrqLsRvYPkGtRvDSSNfmPqvfWnaGCQmVALNfQTsDlp p +fV+yNkr L Rv P + R DSSN +Pq fW+ GCQ+VA NfQT++l mKIAA1092 423 PGDFVNYNKRFLARVFPSPMRIDSSNMNPQDFWKCGCQIVAMNFQTPGLM 472 mqiNdGmFeyNggqPdGsfksGYlLKPeflR<-* m++N G F Ng +GY+L P+ +R mKIAA1092 473 MDLNVGWFRQNGN-------CGYVLRPAIMR 496 C2: domain 1 of 1, from 518 to 608: score 87.7, E = 2.3e-22 *->LrVtvieAknLppkDf...kngksDPYVkvslggdkkd.qkkkTkvi L++++i+++n p+ +++ k+ DPYV v+++g + d ++Tk++ mKIAA1092 518 LHIKIISGQNFPKPKGsgaKGDVVDPYVYVEIHGIPADcAEQRTKTV 564 kkt.lNPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* + ++ P+++E+F+F++++p+l++ +++ V D+d +g d+f+G+ + mKIAA1092 565 NQNgDAPIFDESFEFQINLPELAM-VRFVVLDDDYIG-DEFIGQYT 608 //