hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10728/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1087  ( 723 res)   mbg10728

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Calx_beta Domains in Na-Ca exchangers and integrin-be   344.0    9.8e-99   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Calx_beta   1/2     185   285 ..     1   106 []   172.0    6e-47
Calx_beta   2/2     314   414 ..     1   106 []   178.6  6.1e-49

Alignments of top-scoring domains:
Calx_beta: domain 1 of 2, from 185 to 285: score 172.0, E = 6e-47
                   *->atvtilDddhagtvgFeqphytVsEsdGevevtVvRtggtargtvvV
                        +++ +dd a++++Fe++ y+++E++G+v + V ++gg+ ++t++V
   mKIAA1087   185    DGAPDDEDDGASRIFFEPSLYHCLENCGSVLLSVACQGGEGNSTFYV 231  

                   pyrTedGTAtaGgsDYepvdIeGtLtFepgegtekeIrikiidDdiyEer
                   +yrTedG+A+aG sDYe+   eGtL+F+pge t+k +ri+iidDdi+Ee 
   mKIAA1087   232 DYRTEDGSAKAG-SDYEYS--EGTLVFKPGE-TQKDLRIGIIDDDIFEE- 276  

                   dEtFyvrLs<-*
                   dE+F+vrL+   
   mKIAA1087   277 DEHFFVRLL    285  

Calx_beta: domain 2 of 2, from 314 to 414: score 178.6, E = 6.1e-49
                   *->atvtilDddhagtvgFeqphytVsEsdGevevtVvRtggtargtvvV
                      atvtilDddhag+++F++   +VsE++G+v+v+VvR++g argtv+ 
   mKIAA1087   314    ATVTILDDDHAGIFSFQDRLLHVSECMGTVDVRVVRSSG-ARGTVRL 359  

                   pyrTedGTAtaGgsDYepvdIeGtLtFepgegtekeIrikiidDdiyEer
                   pyrT+dGTA++Gg++Ye++  +G+L+F+++e t+k++++ki+dD++yE+ 
   mKIAA1087   360 PYRTVDGTARGGGVHYEDA--CGELEFGDDE-TMKTLQVKIVDDEEYEK- 405  

                   dEtFyvrLs<-*
                    ++F+++L+   
   mKIAA1087   406 KDNFFIELG    414  

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