hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg10728/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1087  ( 723 res)   mbg10728

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
Calx-beta Calx-beta domain                              323.7    2.1e-93   2
Na_Ca_ex  Sodium/calcium exchanger protein              109.8    5.1e-29   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
Calx-beta   1/2     186   285 ..     1   109 []   166.7  3.9e-46
Calx-beta   2/2     314   414 ..     1   109 []   162.6  6.9e-45
Na_Ca_ex    1/1     559   712 ..     1   141 []   109.8  5.1e-29

Alignments of top-scoring domains:
Calx-beta: domain 1 of 2, from 186 to 285: score 166.7, E = 3.9e-46
                   *->atvtIlDdddagvvgFeptvyqVsVlEndGevevcVvrmggapelrr
                       + +++Dd  a++++Fep+ y++  lEn+G+v + V++ gg  e ++
   mKIAA1087   186    GAPDDEDD-GASRIFFEPSLYHC--LENCGSVLLSVACQGG--EGNS 227  

                   tVtVsyrTeDGTAtaGPgsDYeptegtiLtFgPgedtekcinvtiiDDdv
                   t++V+yrTeDG+A+aG  sDYe+ egt L+F+Pge t+k  +++iiDDd+
   mKIAA1087   228 TFYVDYRTEDGSAKAG--SDYEYSEGT-LVFKPGE-TQKDLRIGIIDDDI 273  

                   yEgdEnFfvrLs<-*
                   +E+dE+FfvrL    
   mKIAA1087   274 FEEDEHFFVRLL    285  

Calx-beta: domain 2 of 2, from 314 to 414: score 162.6, E = 6.9e-45
                   *->atvtIlDdddagvvgFeptvyqVsVlEndGevevcVvrmggapelrr
                      atvtIlDdd+ag+++F+++  +V   E++G+v+v+Vvr +g   +r+
   mKIAA1087   314    ATVTILDDDHAGIFSFQDRLLHV--SECMGTVDVRVVRSSG---ARG 355  

                   tVtVsyrTeDGTAtaGPgsDYeptegtiLtFgPgedtekcinvtiiDDdv
                   tV  +yrT+DGTA +G g++Ye+++g+ L Fg++e t+k+  v+i+DD++
   mKIAA1087   356 TVRLPYRTVDGTARGG-GVHYEDACGE-LEFGDDE-TMKTLQVKIVDDEE 402  

                   yEgdEnFfvrLs<-*
                   yE+ +nFf++L+   
   mKIAA1087   403 YEKKDNFFIELG    414  

Na_Ca_ex: domain 1 of 1, from 559 to 712: score 109.8, E = 5.1e-29
                   *->lliilladllvdsaeaiaevlgisptviGlTllAlGtslPEliasii
                      l i +l+ l++d a++++++ g+ ++v +++++AlGts+P+++as +
   mKIAA1087   559    LVIGVLTALIGDLASHFGCTVGLKDSVNAVVFVALGTSIPDTFASKV 605  

                   aalkrlgtg.tekkgdlalGnviGSnifNillvlGlaalispir......
                   aal+    +++   +d ++Gnv+GSn +N++l+lG+a+ +++ +   +++
   mKIAA1087   606 AALQ----DqC---ADASIGNVTGSNAVNVFLGLGVAWSVAAVYwavqgr 648  

                   .vlg.plsldfsllllvtlllllflllf...........lsdgrlsrleG
                   ++++++ +l fs++l+++++++++++l+ +++++ +++ ++++  +  + 
   mKIAA1087   649 pFEVrAGTLAFSVTLFTVFAFVCIAVLLyrrrpqiggelGGPRGPKLATT 698  

                   lvLlllYivyllfl<-*
                   +++l+l+++y+lf+   
   mKIAA1087   699 ALFLGLWFLYILFS    712  

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