hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh01320/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1076  ( 855 res)   mbh01320

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SET      SET (Su(var)3-9, Enhancer-of-zeste, Trithora   135.2      7e-36   1
PostSET  Cysteine-rich motif following a subset of SE    34.7    1.3e-05   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SET        1/1     716   839 ..     1   114 []   135.2    7e-36
PostSET    1/1     839   855 .]     1    17 []    34.7  1.3e-05

Alignments of top-scoring domains:
SET: domain 1 of 1, from 716 to 839: score 135.2, E = 7e-36
                   *->aklevfkskgkGwGlratedIpkGefIleyvGeii............
                      +kl+  ks ++ wGl+a+e+I+++e+++eyvG  i++   + ++++ 
   mKIAA1076   716    KKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIrqviadmrekry 762  

                   .......fylfd.....ciDatranggkGniarfiNHSCePNcelifvev
                   ++++ +++y+f+ ++++ iDat+     Gn+arfiNHSC+PNc+++++ v
   mKIAA1076   763 edegigsSYMFRvdhdtIIDATK----CGNFARFINHSCNPNCYAKVITV 808  

                   dgfdprgasdsadprivifAlrdIkpGEELtidYgddyege<-*
                   +            ++ivi+++++I  +EE+t+dY++  e+    
   mKIAA1076   809 ES----------QKKIVIYSKQHINVNEEITYDYKFPIEDV    839  

PostSET: domain 1 of 1, from 839 to 855: score 34.7, E = 1.3e-05
                   *->kkqpClCGaanCrGfLg<-*
                      +k+pClCG++nCrG+L+   
   mKIAA1076   839    VKIPCLCGSENCRGTLN    855  

//