hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06278/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1072  ( 665 res)   mbg06278

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PP2Cc    Serine/threonine phosphatases, family 2C, ca   252.3    3.8e-71   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PP2Cc      1/1     132   399 ..     1   338 []   252.3  3.8e-71

Alignments of top-scoring domains:
PP2Cc: domain 1 of 1, from 132 to 399: score 252.3, E = 3.8e-71
                   *->es.sgknlglryglgessmqgwrkpmEDahvirp.............
                       ++++  ++++y  +++++++ r++mED hv++p+ +   + +++++
   mKIAA1072   132    DFpLRRRPQIYYETSIHAIKNMRRKMEDKHVCIPdfnmlfnledqee 178  

                   ..ffgVfDGHGGseaakflsknlheilaeelsfdkdeslkeneelkdepe
                   + +f+VfDGHGG +aa ++s +lh +l++++ f+                
   mKIAA1072   179 qaYFAVFDGHGGVDAAIYASVHLHVNLVRQEMFP---------------- 212  

                   sserlngdksledveealrkaFlrtdeei............sTAvvalir
                              +d+ eal +aF+ tde++ ++  +++ + ++T vv +ir
   mKIAA1072   213 -----------HDPAEALCRAFRVTDERFvqkaareslrcgTTGVVTFIR 251  

                   gnklyvANvGDSRavLcrngkdswegvrtysavqLteDHkpsnedEreRI
                   gn l+vA+vGDS+++L r+g+          av+L + Hkp++edE++RI
   mKIAA1072   252 GNMLHVAWVGDSQVMLVRKGQ----------AVELMKPHKPDREDEKQRI 291  

                   eaaGGevepidrefvsngggvvwRvnGvvisLavsRalGDfelKkkedel
                   ea+GG v      +   +     RvnG+   L vsRa+GD e K      
   mKIAA1072   292 EALGGCVV-----WFGAW-----RVNGS---LSVSRAIGDAEHK------ 322  

                   ieenrlyekfdprlpgkepyvsaePevtvvelsqtlvptedddfliLASD
                                     py+  + +  ++ l      +   d liLA+D
   mKIAA1072   323 ------------------PYICGDADSASTVL------DGTEDYLILACD 348  

                   GLWDvlsnqeavdivrkhlrkgddkevksaaqelaradslrskkhndpke
                   G +D ++++eav +v +hl                       ++++d ++
   mKIAA1072   349 GFYDTVNPDEAVKVVSDHL----------------------KENNGDSSM 376  

                   aaklLvdlAl....kDNiTvvvv<-*
                   +a +Lv  A++ +++DNiTv+vv   
   mKIAA1072   377 VAHKLVASARdagsSDNITVIVV    399  

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