hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg06278/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1072  ( 665 res)   mbg06278

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PP2C     Protein phosphatase 2C                         267.9    1.4e-76   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PP2C       1/1     143   394 ..     1   305 []   267.9  1.4e-76

Alignments of top-scoring domains:
PP2C: domain 1 of 1, from 143 to 394: score 267.9, E = 1.4e-76
                   *->ldvgvsrmqgwrksmeDahialknlnsss..sgkdswsffavfDGhg
                      ++ +++++ + r++meD h++++++n  ++ ++ ++ ++favfDGhg
   mKIAA1072   143    YETSIHAIKNMRRKMEDKHVCIPDFNMLFnlEDQEEQAYFAVFDGHG 189  

                   GsqaakyagkhlhktilaerksfpegdpwEmklsdledalkesfleadtd
                   G +aa ya+ hlh   l ++++fp +         + +al  +f+   td
   mKIAA1072   190 GVDAAIYASVHLH-VNLVRQEMFPHD---------PAEALCRAFRV--TD 227  

                   eelrsaeassankvltkedlssGsTAvvalirgnkklLyVANvGDSRavL
                   e + +   ++a+     e l++G+T vv +irgn   L+VA+vGDS+++L
   mKIAA1072   228 ERFVQ---KAAR-----ESLRCGTTGVVTFIRGNM--LHVAWVGDSQVML 267  

                   crngnaikwavtLteDHkPsnedEreRIeaaGGfvsrvsgngRvnGvfLa
                    r+g+a+    +L++ HkP++edE++RIea+GG v +    +RvnG+ L 
   mKIAA1072   268 VRKGQAV----ELMKPHKPDREDEKQRIEALGGCVVWFG-AWRVNGS-LS 311  

                   vSRAfGDfelKpgsklgpeesleanyeyikspeqlVtaePdvtsstdltp
                   vSRA+GD e Kp                      ++  + d   st l+ 
   mKIAA1072   312 VSRAIGDAEHKP----------------------YICGDADSA-STVLDG 338  

                   dkDeFliLAcDGLWDvvsdqevvdivrselsdgnrsagdpmeaaeklvde
                     +++liLAcDG++D+v+++e+v +v ++l+++n   gd +++a klv  
   mKIAA1072   339 T-EDYLILACDGFYDTVNPDEAVKVVSDHLKENN---GDSSMVAHKLVAS 384  

                   aiargseDni<-*
                   a++ gs+Dni   
   mKIAA1072   385 ARDAGSSDNI    394  

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