hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mbg/mbg05205/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA1070 ( 846 res) mbg05205 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- COesterase Carboxylesterase 712.0 2.8e-210 1 Abhydrolase_3 alpha/beta hydrolase fold -76.0 0.06 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Abhydrolase_3 1/1 199 380 .. 1 247 [] -76.0 0.06 COesterase 1/1 32 629 .. 1 591 [] 712.0 2.8e-210 Alignments of top-scoring domains: Abhydrolase_3: domain 1 of 1, from 199 to 380: score -76.0, E = 0.06 *->lvYfHGGGFvlGsldthYdalcrrLAaragavVvSVDYR......LA +vY+HGG ++ G+ + + d + A++ +++V+ V+YR + + L+ mKIAA1070 199 MVYIHGGSYMEGTGNLY-DGSVL--ASYGNVIVITVNYRlgvlgfLS 242 PEhpfPA...AvdDayaAlrWlaehavgsggeddpwlelgaDpsriavaG ++ + D AlrW e+ +g+Dp ri+v+G mKIAA1070 243 TGDQAAKgnyGLLDLIQALRWTSENI---------G-FFGGDPLRITVFG 282 DSAGGNLAaavAqlrardrGgplaeldpdlspvrpagqvLiyPfFggtDl AGG + + + L + + mKIAA1070 283 SGAGGS-----C----------------------VNLLTLSHY---SE-- 300 rertesesyrlsreyadgplLtrdamdwfwrlYLpgadrddPaslasPlf + + ++ l+ r+ + + l+ + +s mKIAA1070 301 ------GNR---WSNSTKGLFQRAIAQSGTALSS-------W--AVS-F- 330 apaspdlegLsGLPPalvvvAefDpLrDegeaYAerLra.WaGVpVelve ++ ++ l ++ + +++ e L+++ V+ + mKIAA1070 331 -----Q---PAKYARILATKVGC--NVSDTVELVECLQKkPYKELVDQDV 370 ypGmiHgFll<-* p H + mKIAA1070 371 QPARYHIAFG 380 COesterase: domain 1 of 1, from 32 to 629: score 712.0, E = 2.8e-210 *->mllllllllllllflavvataptspedpvVeTsyvgGkvrGlrvkvd + l+ll++ll ++ ++ ++ p V T+ Gk+rG++ + + mKIAA1070 32 LTLCLLGCLLQTFHVLSQKLDDVDP---LVTTNF--GKIRGIKKELN 73 g.gnkpvyaFlGIPYAkPPvGeLRFkkPqPypepWtgvldATkygpaCpQ +++ +pv +FlG+PYA+PP+Ge+RF++P+P p+pW+++++AT+++p+CpQ mKIAA1070 74 NeILGPVIQFLGVPYAAPPTGEHRFQPPEP-PSPWSDIRNATQFAPVCPQ 122 .ndlgfpgFslal.hv.gsemwnkntg......ksmSEDCLYLNVytPkl ++ g +l++v ++ ++ n+ ++ +++SEDCLYLN+y+P+ mKIAA1070 123 nIIDG------RLpEVmLPVWFTNNLDvvssyvQDQSEDCLYLNIYVPTE 166 asesk.......................klPVmVwIHGGGFqsGsassvt + + ++++++ +++++ ++++ ++++++ PVmV+IHGG +++G++ mKIAA1070 167 DGPLTkkhtddlgdndgaededirdsggPKPVMVYIHGGSYMEGTG---- 212 lddydgpdlaasedVVVVtiNYRLGalGFLstgdselppppGNaGLlDQv ++ydg++la++++V+V+t+NYRLG+lGFLstgd+ ++ GN+GLlD + mKIAA1070 213 -NLYDGSVLASYGNVIVITVNYRLGVLGFLSTGDQAAK---GNYGLLDLI 258 lALrWVqeNIaaFGGDPdnVTlFGeSAGAaSVsllllS........ppqs +ALrW eNI +FGGDP ++T+FG +AG+++V+ll+lS+ +++++ ++ mKIAA1070 259 QALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLShysegnrwSNST 308 rGLFhrAIlqSGsalspwaits.pearnrakrlAkllGCpgedseelveC +GLF+rAI qSG+als+wa++ +p ++a+ lA+++GC+ +d elveC mKIAA1070 309 KGLFQRAIAQSGTALSSWAVSFqP--AKYARILATKVGCNVSDTVELVEC 356 LRkksaeelldaqwklllleefgffplfaFgPVvdGdtpdaflpkdPeel L+kk+ +el+d++ +++++ f PV+dGd ++p+dP++l mKIAA1070 357 LQKKPYKELVDQDV--QPARYHIAFG-----PVIDGD----VIPDDPQIL 395 lkegnfnkvPlliGvtsdEGllflayvl.dp.lsadllseidnedlflel +++g f ++++++Gv++ EGl f+ + + ++ + s +d+++ ++ mKIAA1070 396 MEQGEFLNYDIMLGVNQGEGLKFVENIVdSDdGV----SASDFDF-AVSN 440 lpellpgase.ltlklreeiadalkeeYtdd.dd.nseesrdalldllsD ++++l+g++e++ + +++++k++Ytd+ d++n+e+ r+ ll l++D mKIAA1070 441 FVDNLYGYPEgK-----DVLRETIKFMYTDWaDRhNPETRRKTLLALFTD 485 ylFvcPilrlaaaraakagapvYlYrFdyrssdsfnqylinllwppwrgv +++v+P +++ a+ ++++g+p+Y+Y F +++ ++ p w + mKIAA1070 486 HQWVAP-AVATADLHSNFGSPTYFYAFYHHCQ--------TDQVPAWADA 526 sHgdelsYvFGnpls.k.ly....steeeeklssrrmmrywtnFAktGnP Hgde++Yv+G p++++++ + ++++ + +ls +++m+ywtnFAktG+P mKIAA1070 527 AHGDEVPYVLGIPMIgPtELfpcnFSKNDVMLS-AVVMTYWTNFAKTGDP 575 N.............ngessglpkWppytkeeqkyylpitllnisqk.lre N++ +++++ +++++ ++++ W +y++++q yl+i+l+++++ ++r+ mKIAA1070 576 NqpvpqdtkfihtkPNR-FEEVAWTRYSQKDQ-LYLHIGLKPRVKEhYRA 623 ldPrkvkcafw<-* ++ +++w mKIAA1070 624 NK-----VNLW 629 //