hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj10223/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1069  ( 1289 res)   mfj10223

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PLCYc    Phospholipase C, catalytic domain (part); do   178.0    9.3e-49   1
C2       Protein kinase C conserved region 2 (CalB)      88.2      1e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PLCYc      1/1     229   342 ..     1   119 []   178.0  9.3e-49
C2         1/1     361   469 ..     1    92 []    88.2    1e-21

Alignments of top-scoring domains:
PLCYc: domain 1 of 1, from 229 to 342: score 178.0, E = 9.3e-49
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                      ls+Lv+y  +v  + ++++  +     +++SfsEt  a + ++++ +
   mKIAA1069   229    LSDLVVYTNSVAAQDIVDDGTT----GNVLSFSETR-AHQVVQQKSE 270  

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   +f  yNq+qL+R+YP++ R+DSSN+nP+++WnaGcQ+VALN+Q  +++Mq
   mKIAA1069   271 QFMIYNQKQLTRIYPSAYRIDSSNFNPLPYWNAGCQLVALNYQSEGRMMQ 320  

                   lNqGmFraNGgCGYVLKPefLR<-*
                   +N ++F aNG+CGY+LKP  +    
   mKIAA1069   321 INRAKFKANGNCGYILKPQQMC    342  

C2: domain 1 of 1, from 361 to 469: score 88.2, E = 1e-21
                   *->tLtvkiisArnLp..............DPYVkvs...........kT
                      +L +k+is+++Lp+++++  ++++   DP+V+v+  + + +  +++T
   mKIAA1069   361    QLILKVISGQQLPkppdsmfgdrgeiiDPFVEVEiiglpvdcckdQT 407  

                   kvvkktlsgfNPvWnEesetFeFevpp...s.LeieVyDk.....dfiGr
                   +vv +++  fNPvW+E   t++F+v+ ++ + +++ V+D+++ ++df+G+
   mKIAA1069   408 RVVDDNG--FNPVWEE---TLTFTVHMpeiAlVRFLVWDHdpigrDFVGQ 452  

                   vtippnnahqhsadglihlsell.ggrh.kl<-*
                    t+               +s+l +g+rh  l   
   mKIAA1069   453 RTVT--------------FSSLVpGYRHvYL    469  

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