hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbj/mbj00492/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1068  ( 107 res)   mbj00492

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Nuclear_move Nuclear movement protein                    31.7      4e-07   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
Nuclear_move   1/1       1    79 [.     1   160 []    31.7    4e-07

Alignments of top-scoring domains:
Nuclear_move: domain 1 of 1, from 1 to 79: score 31.7, E = 4e-07
                   *->nsgnGadlenYqWtQTLqEVevrvPvPkgtalKakdvvVdisksslk
                       +  G             ++ev+                        
   mKIAA1068     1    RHRSG-------------DAEVN------------------------ 10   

                   VglkGqepeVivdGkLyhkikaeEStWtlEdtkrkgkrvvitLeKvNkME
                                                             L+Kv+++ 
   mKIAA1068    11 ------------------------------------------LSKVGEY- 17   

                   WWnrllegePeIDtkkinPEnSKLsDLDeETRamVEKMMyDQrQKemGlP
                   WW+++lege++ID++kin+E+S ++++DeE++a+++++++D++QK++G+P
   mKIAA1068    18 WWSAILEGEEPIDIDKINKERS-MATVDEEEQAVLDRLTFDYHQKLQGKP 66   

                   tSdEqKkqdiLkK<-*
                   +S+E+K++++LkK   
   mKIAA1068    67 QSHELKVHEMLKK    79   

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