hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg15986/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1067  ( 683 res)   mbg15986

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Exo70    Exo70 exocyst complex subunit                  892.5   1.3e-264   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Exo70      1/1      68   680 ..     1   710 []   892.5 1.3e-264

Alignments of top-scoring domains:
Exo70: domain 1 of 1, from 68 to 680: score 892.5, E = 1.3e-264
                   *->qqsfslspiqkrieaaediqgnIekwvskyahvsssydkvsslfsIl
                      ++++s++p++k++e+++++q+n+ek++s+ +hv+s+y+++s++++I+
   mKIAA1067    68    KLENSIIPVHKQTENLQRLQENVEKTLSCLDHVISYYHVASDTEKII 114  

                   rsgpreselkrflkvvkkLqdalkflqsnnaerpasaeLlkalldedLmq
                   r+gp++ +l+++l++++k+q+a++++q+n+   p+s+eL+k+    +L++
   mKIAA1067   115 REGPTG-RLEEYLGSMAKIQKAVEYFQDNS---PDSPELNKV----KLLF 156  

                   iamereasLqkeFlsilselhsssaeesnRsqLdpdsisgdsslesledv
                   +++++  sL++eF+s+++ +hs+    +++++L +d is+d++le++edv
   mKIAA1067   157 ERGKE--SLESEFRSLMT-RHSK----VVSPVLLLDLISADDELEVQEDV 199  

                   vrvlldesvlrlvviiHWLEQNLREYTNiralvryervqdsgslpykarv
                   v+++l+esvlr+vv+i            +r+lv+y+r+qd+++++y++r 
   mKIAA1067   200 VLEHLPESVLRDVVRI------------SRWLVEYGRNQDFMNVYYQIR- 236  

                   kkssSklldsiieRHGRlsevsatvmsdLksIaqrmiangyLGlDTPTke
                      sS+l++si++    l+e++++++s+++++++++i+n++  +DTPTk+
   mKIAA1067   237 ---SSQLDRSIKG----LKEHFRKSSSSSGVPYSPAIPNKR--KDTPTKK 277  

                   CikiyksiRkskiveeslsqLgleklsigkvqkmdwevvedkikVLkWle
                   +ik++++                                +d+++  ++++
   mKIAA1067   278 PIKRPGVPLGR----------------------------DDMLD--VETD 297  

                   avkvavstLlsgEkslcdlvFeaspstirescFaeIvkdalallLfefpe
                   a++++vs+++++++s+++l++e++p+++++++F+++++dal++l++e+++
   mKIAA1067   298 AYIHCVSAFVKLAQSEYRLLMEIIPEHHQKKTFDSLIQDALDGLMLEGEN 347  

                   aVaeskkkkckspekHDF.TlfklLdlydaisdlrLLQpdieelFsfasc
                   +V++++    k++++HDF+T+++++++++++++++   p++++++++++ 
   mKIAA1067   348 IVSAAR----KAIIRHDFsTVLTVFPILRHLKQTK---PEFDQVLQGTA- 389  

                   ssvrnqalsslrrlgegirsilmEfVKGessirkdsDKskvpppgGgVHp
                   +s++n++++++++++++++++l++f   +++i++d+DK++++p++G+VH+
   mKIAA1067   390 ASTKNKLPGLITSMETIGAKALEDF---ADNIKNDPDKEYNMPKDGTVHE 436  

                   LTryvmnFlssLaehFDVIGILAQDVdysetLtqillesplpsdtleipe
                   LT++++ Fl++L+             d++et ++++l+s++ +dt++ip+
   mKIAA1067   437 LTSNAILFLQQLL-------------DFQET-AGAMLASQVLGDTYNIPL 472  

                   dyfetsssdvseseesssslLavyiawiilvLlcnldtKskaYnDqaLsy
                   d++etsss++s+s+e+s++lL++yi++++++L++nl +Ksk+Y+D+aLs+
   mKIAA1067   473 DPRETSSSATSYSSEFSKRLLSTYICKVLGNLQLNLLSKSKVYEDPALSA 522  

                   GlFllNNlnYivkkvrsSqnLkdlLgddwltkheakrEeirqyatsYers
                    +Fl+NN+nYi+k++++S +L++l++++++t+++++rE+i+q++++Y+r 
   mKIAA1067   523 -IFLHNNYNYILKSLEKS-ELIQLVAVTQKTAERSYREHIEQQIQTYQR- 569  

                   sWgkvtssLsdsnlikssggksl.dKdreeaKErFkkFNegFEEackkQs
                   sW kvt++++++nl+++++g++l+dK+r+++KErFk+FN+g+EE+ck+Q+
   mKIAA1067   570 SWLKVTDYIAEKNLPVFQPGVKLrDKERQMIKERFKGFNDGLEELCKIQK 619  

                   ewvipDpkLRdelkqsvkekilPvYrrFyerRaVyygnvdftkNpekYvK
                   +w+ipD+++Rd+++q++k++++++Y++F++r    yg+v+ftkNpekY+K
   mKIAA1067   620 VWAIPDTEQRDKIRQAQKDIVKETYGAFLHR----YGSVPFTKNPEKYIK 665  

                   YtpedLenyLsdLFd<-*
                   Y++e++++++++LFd   
   mKIAA1067   666 YRVEQVGDMIDRLFD    680  

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