hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf00778/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1058  ( 2072 res)   mbf00778

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     70.8    1.7e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1     203   311 ..     1    82 []    70.8  1.7e-16

Alignments of top-scoring domains:
PH: domain 1 of 1, from 203 to 311: score 70.8, E = 1.7e-16
                   *->vikeGwLlkks........k.swkkryfvLfn.....gvLlyyksk.
                      ++k+GwL+k   ++  + + +s+k+r+f L   ++++  L +yk+++
   mKIAA1058   203    ITKHGWLYKGNmnsaisvtMrSFKRRFFHLIQlgdgsYNLNFYKDEk 249  

                   ...kpkgsipLsgc.svre.p.....cFeivt.dr.tlllqAeseeeree
                    +++pkgsi+L++c  v  + + ++ +Fe++++d++++ll+A+se e+ee
   mKIAA1058   250 iskEPKGSIFLDSCmGVIQnNrvrrfAFELKMqDKsSYLLAADSEAEMEE 299  

                   Wvealqsaiaka<-*
                   Wv+ l++ ++ +   
   mKIAA1058   300 WVTVLNKILQLN    311  

//