hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbf/mbf00778/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1058  ( 2072 res)   mbf00778

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Ded_cyto Dedicator of cytokinesis                       386.4   2.8e-112   1
PH       PH domain                                       71.1    2.3e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1     203   309 ..     1    92 []    71.1  2.3e-17
Ded_cyto   1/1    1888  2067 ..     1   192 []   386.4 2.8e-112

Alignments of top-scoring domains:
PH: domain 1 of 1, from 203 to 309: score 71.1, E = 2.3e-17
                   *->vikeGwLlkkg.......gkkswkkRyfvLfn.....dvLlyykdkk
                      ++k+GwL+k   ++  +   +s+k+R+f L + ++++ +L +ykd+k
   mKIAA1058   203    ITKHGWLYKGNmnsaisvTMRSFKRRFFHLIQlgdgsYNLNFYKDEK 249  

                   ..kkpkgsipLsgi.qvekvpdnkrkncFeirt.dretlllqaeseeerk
                    +k+pkgsi L+++  v    +  r+++Fe++++d+ ++ll+a+se e++
   mKIAA1058   250 isKEPKGSIFLDSCmGVIQNNRV-RRFAFELKMqDKSSYLLAADSEAEME 298  

                   eWvkaiqsair<-*
                   eWv+ +++++    
   mKIAA1058   299 EWVTVLNKILQ    309  

Ded_cyto: domain 1 of 1, from 1888 to 2067: score 386.4, E = 2.8e-112
                   *->tyFernnnvrrFmyetPFTknGtAtkaQGeleEQwKRkTiLttensF
                      t+Fer++n+rrFm+e+PFT++G   k+QG++eEQ+KR+TiLt++++F
   mKIAA1058  1888    TEFERCHNIRRFMFEMPFTQTG---KRQGGVEEQCKRRTILTAIHCF 1931 

                   PyiktRilVisreeielsPIEVAIedIqkKtaeLaaainqppadtlpdik
                   Py+k+Ri+V+++++++l+PIEVAI++++kK+aeL++++++++    +d++
   mKIAA1058  1932 PYVKKRIPVMYQHHTDLNPIEVAIDEMSKKVAELRQLCSSAE----VDMI 1977 

                   mLQmvLQGSVgvtVNaGPLevAraFLseepLkadplGrPpdkhinkLrlv
                   +LQ++LQGSV+v+VNaGPL++AraFL++++  ++++   pd++++ L++v
   mKIAA1058  1978 KLQLKLQGSVSVQVNAGPLAYARAFLDDTN--TKRY---PDNKVKLLKEV 2022 

                   freFikrCkrALevnkrLIgeDQkEYqreLkeNYekLkeeLsplI<-*
                   fr+F+++C++AL+vn+rLI+eDQ+EYq+e+k+NY++  +eLs++    
   mKIAA1058  2023 FRQFVEACGQALAVNERLIKEDQLEYQEEMKANYREMAKELSDIM    2067 

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