hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm07344/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1041  ( 595 res)   mpm07344

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
FH       FORKHEAD                                       180.8    1.3e-49   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
FH         1/1      82   170 ..     1    99 []   180.8  1.3e-49

Alignments of top-scoring domains:
FH: domain 1 of 1, from 82 to 170: score 180.8, E = 1.3e-49
                   *->neKPPySYiaLIamAIlsSPekrLTLseIYkwImdnFPYYrenkasn
                        KPPySY++LI+ AI sSP k++TLseIY+wI dnFPYYre++   
   mKIAA1041    82    DGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGS-- 126  

                   sagWqvNSIRHNLSLNdcFvKvprdkegdrpgKGsyWtldPdaeedmfen
                     gW+ NSIRHNLSLN+cF Kvpr  ++d+pgKGsyW++d +    +++ 
   mKIAA1041   127 --GWK-NSIRHNLSLNKCFLKVPR--SKDDPGKGSYWAIDTN---PKEDT 168  

                   gs<-*
                        
   mKIAA1041   169 LP    170  

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