hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg00058/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1040  ( 1719 res)   mbg00058

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
HEAT     HEAT repeat                                     20.0      0.057   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
HEAT       1/2     818   848 ..     1    36 []     6.7       28
HEAT       2/2    1142  1178 ..     1    36 []    13.2      3.5

Alignments of top-scoring domains:
HEAT: domain 1 of 2, from 818 to 848: score 6.7, E = 28
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                       ++l      l k +++p+++ Re  aeaL +l++     
   mKIAA1040   818    TgHL------LEKVCQHPNSRMREWGAEALTSLIRAG    848  

HEAT: domain 2 of 2, from 1142 to 1178: score 13.2, E = 3.5
                   *->e.lldellplllkllnDpdpeVReaAaeaLgalaevl<-*
                      +++ d ll ++++++ +++ eV +aA+++++++++++   
   mKIAA1040  1142    SrAWDVLLDHIQSAALSKNNEVSLAALKSFQEILQIV    1178 

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