hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpg/mpg00453/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1031  ( 698 res)   mpg00453

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TPR      Tetratricopeptide repeats                       38.4    9.5e-07   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TPR        1/2     121   154 ..     1    34 []    26.8   0.0031
TPR        2/2     155   188 ..     1    34 []    12.3       20

Alignments of top-scoring domains:
TPR: domain 1 of 2, from 121 to 154: score 26.8, E = 0.0031
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                       + + n++ +y+ +g y++A+e+ ekAL ld +    
   mKIAA1031   121    CKLHVNRAACYFTMGLYEKALEDSEKALGLDGES    154  

TPR: domain 2 of 2, from 155 to 188: score 12.3, E = 20
                   *->aealynlGnaylklgdydeAieyyekALeldPnn<-*
                      ++al++++ a+  lg+++eA e+ +++    P++   
   mKIAA1031   155    IRALFRKARALNELGRHKEAYECSSRCSLALPHD    188  

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