hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05217/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1014  ( 1071 res)   mpm05217

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
WW                                                       72.2    6.5e-17   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WW         1/2     259   292 ..     1    34 []    32.5  5.9e-05
WW         2/2     644   677 ..     1    34 []    46.8  2.9e-09

Alignments of top-scoring domains:
WW: domain 1 of 2, from 259 to 292: score 32.5, E = 5.9e-05
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                         + W e++d+++G +YY+N++T e +We P+    
   mKIAA1014   259    IEMGDWQEVWDENTGCYYYWNTQTNEVTWELPQY    292  

WW: domain 2 of 2, from 644 to 677: score 46.8, E = 2.9e-09
                   *->plPpgWeerkdpdsGrpYYyNheTketqWekPre<-*
                        P gW +++d+d+ r++Y+N +++e+qWe P++   
   mKIAA1014   644    ATPKGWSCHWDRDHRRYFYVNEQSGESQWEFPDG    677  

//