hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm05217/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA1014  ( 1071 res)   mpm05217

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
WW       WW domain                                       54.2    2.8e-12   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
WW         1/2     260   290 ..     1    30 []    29.1   0.0001
WW         2/2     645   675 ..     1    30 []    32.5  9.4e-06

Alignments of top-scoring domains:
WW: domain 1 of 2, from 260 to 290: score 29.1, E = 0.0001
                   *->LppgWeerkd.pdGrpYYyNhnTktTqWekP<-*
                          W e++d+  G +YY+N++T++ +We P   
   mKIAA1014   260    EMGDWQEVWDeNTGCYYYWNTQTNEVTWELP    290  

WW: domain 2 of 2, from 645 to 675: score 32.5, E = 9.4e-06
                   *->LppgWeerkd.pdGrpYYyNhnTktTqWekP<-*
                       p gW  ++d+++ r++Y+N +++++qWe P   
   mKIAA1014   645    TPKGWSCHWDrDHRRYFYVNEQSGESQWEFP    675  

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