hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm12090/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0996  ( 804 res)   mpm12090

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ZnF_C2H2 zinc finger                                     26.2     0.0047   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ZnF_C2H2   1/1     190   213 ..     1    23 []    26.2   0.0047

Alignments of top-scoring domains:
ZnF_C2H2: domain 1 of 1, from 190 to 213: score 26.2, E = 0.0047
                   *->ykCpigCgksfssk.aLkrHmr.vH<-*
                      y+C++ C+k f ++  L+ H++++H   
   mKIAA0996   190    YQCHF-CDKAFMNQaFLQSHIQrRH    213  

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