hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg21374/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0984  ( 816 res)   mbg21374

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TBC      TBC domain                                      69.4    7.4e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TBC        1/1     134   367 ..     1   219 []    69.4  7.4e-17

Alignments of top-scoring domains:
TBC: domain 1 of 1, from 134 to 367: score 69.4, E = 7.4e-17
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerll......rrgdek
                         G p   r kVW+ +    +l+   a    + ++ + ++r ++  
   mKIAA0984   134    LSTGIPKEWRRKVWLTLAD-HYLH-SIAIDWDKTMrftfneRSNPDD 178  

                   esqavdkIekDvkRtLvkesaFqsrGKGegisk..LrrvLvAYswknPdv
                    s  + +I kD+ Rt    s +   G+   + +  L+rvL AY + n  v
   mKIAA0984   179 DSMGI-QIVKDLHRT--GCSSYC--GQEAEQDRvvLKRVLLAYARWNKNV 223  

                   gYcQGMNVvaApfLllyk.SEeqAFyfLdrLlenvvPlKYylpdldGvrl
                   gYcQG N++aA  L  + + E +A  ++  L++ v+P  Y+  +l     
   mKIAA0984   224 GYCQGFNILAALILEVMEgNEGDALKIMIYLIDKVLPESYFVNNLRALSV 273  

                   DqkvLdsfveellprLYeYLlskgvdl.............kvvsLpwfLs
                   D  v+   +  +lp+L  +L  +  +++++++++ +++ + v  + wfL+
   mKIAA0984   274 DMAVFRDLLRLKLPELSQHLDTLQRTAnkesgggyeppltNVFTMQWFLT 323  

                   LyattlPleeAlrIfDiLFadGivllfrvaLAvLkilkeqiLda<-*
                   L+at lP    l+I+D  F +G+ + +rv LA+   l eqi  +   
   mKIAA0984   324 LFATCLPNHTVLKIWDSVFFEGSEIILRVSLAIWAKLGEQIECC    367  

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