hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mib/mib04069/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0981 ( 2117 res) mib04069 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PIP5K Phosphatidylinositol-4-phosphate 5-Kinase 388.5 6.7e-113 1 FYVE FYVE zinc finger 74.0 3.1e-18 1 DEP Domain found in Dishevelled, Egl-10, and P 46.8 4.8e-10 1 Cpn60_TCP1 TCP-1/cpn60 chaperonin family -206.3 0.22 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- FYVE 1/1 173 239 .. 1 77 [] 74.0 3.1e-18 DEP 1/1 385 458 .. 1 80 [] 46.8 4.8e-10 Cpn60_TCP1 1/1 579 1095 .. 1 537 [] -206.3 0.22 PIP5K 1/1 1866 2103 .. 1 361 [] 388.5 6.7e-113 Alignments of top-scoring domains: FYVE: domain 1 of 1, from 173 to 239: score 74.0, E = 3.1e-18 *->phWvpDeevsnCmrCgkpFtkltkRrHHCRaCGrifCgsCssktvll +W+pD+ ++C+ C+++Ft ++RrHHCR CG+ifC+ C++++++ mKIAA0981 173 QYWMPDSQCKECYDCSEKFT-TFRRRHHCRLCGQIFCSRCCNQEIPG 218 pylgiaallkndviekpvRVCdsCydrlnk<-* + +g + R+C C mKIAA0981 219 KFMG---------YTGDLRACTYCRKIALS 239 DEP: domain 1 of 1, from 385 to 458: score 46.8, E = 4.8e-10 *->pesgvklkdrkwlkkvipncFtGselVdWLmdnlsgiidrkeAlhla sg ++d+++ ++++pnc +G+elV+WL+ n++ i +r++A+ ++ mKIAA0981 385 HTSGMEFQDHRYWLRTHPNCIVGKELVNWLIRNGH-IATRAQAIAIG 430 qlLlkeGyirhvgdhltgkndhtFldkqtyYrf<-* q +++ + v + +d+ F+d +++Yr mKIAA0981 431 QAMVDGRWLDCV-----SHHDQLFRDEYALYRP 458 Cpn60_TCP1: domain 1 of 1, from 579 to 1095: score -206.3, E = 0.22 *->ladi.vkttLGPkGrnKmlvngsyGditiTnDGaTIlkeielqhPye ++d+ +k +L n ++ +s ++ T + h mKIAA0981 579 ISDAfIKESL----FNRRVEEKS-KELPFT--------PLGWHHN-- 610 nlgAkllveaskkQddevGDGTTtvvvLAgeLLkeaekLinaGlhPtqIi +ll+e ++ ++++ +e L+ a+++ mKIAA0981 611 --NLELLRE--ENEEKQA-----------------MERLLSANHN----- 634 rGyelAaekaleaLkklsipvetndkinkeellkvAktslnsKvisgnsi ++++ L++l + + + +s ++i + mKIAA0981 635 --------HMMALLQQLLQNESLS-------------SSW-RDIIVSLVC 662 adAlakvgvdavitveeekndkysfdldnievvkglGgsifdsglisGyv + + + ++ v+ +++ ++++ k++Gg +fds +++G+v mKIAA0981 663 Q--VVQTVRPDVKHQDDDM-----DIRQFVHIKKIPGGKKFDSVVVNGFV 705 itkeerhpvelempkrlendaKIavlncpLeiLelktetkrplviiasde tk+ h+ m ++n +KI++l+c++e +l e+ + mKIAA0981 706 CTKNIAHK---KMNSCIKN-PKILLLKCSIE--YLYREET-------KFT 742 dleaLstlEenklkgkvkviavkkRvcdgpnvvitqkegidDiAlhtlad ++ ++ +E+++lk++v+ i++ p +v+++k ++ iA++ l mKIAA0981 743 CIDPIVLQEREFLKNYVQRIVDV-----RPTLVLVEK-TVSRIAQDMLL- 785 tvisdkagImalrrvskedlgrlakvlgakvvttligpgagsedeeeiGe ++gI + v+ +l+r+++ + + v +++ + ++ ++G mKIAA0981 786 -----EHGITLVINVKSQVLERISRMTQGDLVVSMDQLL----TKPHLGT 826 rdevleqeigestsddkvt...kleerkarLsgkvatIllRGateveldE ++ ++ q+ ++ + +++ + ++e++ +tI+lRG++++el mKIAA0981 827 CHKFYMQI-FQ-LPNEQTKtlmFFEGCPQ---HLGCTIKLRGGSDYELAR 871 lerrieDAlnavkaaiedgriVPGGGaaEielakaLdkyk.......... ++ + + + a + +e++ +d++ +++ ++++ mKIAA0981 872 VKEIL---IFMICVAYHSQ----------LEISFLMDEFAmpptlmqsps 908 .................................................. + ++++++++ ++++ ++++ +++++ +++ ++++++ ++++ ++ mKIAA0981 909 fhlltegrgeegasqeqvsgsslpqdpecprealssedstllesrtvlek 958 .................................................. ++ ++++ ++ + ++++ ++++ + + + +++ + + ++++ mKIAA0981 959 geldnqsipqavaslkhqdyttptcpagipcalfalvpesllplhmdqqd 1008 .........akslegkeqlaveafakALeviPkiLAeNAGldgidviskL +++++++ ++ ++++q ++ +kA++ L + G+ v ++ mKIAA0981 1009 avgneqpetSQQ-TDEQQDP-KSQMKAFRD---PLQDDTGM---YVTEEV 1050 raehakGnsdlknyGydaatgkivdmveaGIiDplkVkrqalklAteaAs + + + ++++ ++++ D + ++ ++++ mKIAA0981 1051 TSSED--Q-----------RKTYALTFKQELKDVILCISPVITF---REP 1084 liLtiDdiImakp<-* +Lt m ++ mKIAA0981 1085 FLLTEKG--MRCS 1095 PIP5K: domain 1 of 1, from 1866 to 2103: score 388.5, E = 6.7e-113 *->lSlCsspllrElsspGkSGSrFYlsqDdrFiIKtvkksEvkvLlkmL +Sl++s+++ ++++GkSG++FY+++DdrFi+K++++ Ev+++l+++ mKIAA0981 1866 RSLSHSSPW--QARGGKSGAAFYATEDDRFILKQMPRLEVQSFLDFA 1910 PgYYehinqnpgQkrnTLLpKFfGlyrvkvkgsvgnkekkkkirfvVMnN P+Y+++i+++ +Qkr+T L+K++G+yr+ +k+s++n+ekk ++++VM+N mKIAA0981 1911 PHYFNYITNAVQQKRPTALAKILGVYRIGYKNSQNNTEKK--LDLLVMEN 1958 LFpselkihrkYDLKGStygReaskkekrLaeekelpTLKDlDfleeg.q LF++ +k+++++DLKGS+++R++++++++ e+++++L+D+++l+++++ mKIAA0981 1959 LFYG-RKMAQVFDLKGSLRNRNVKTDTGK---ESCDVVLLDENLLKMVrD 2004 kglyldslskkaLlkqikrDCefLeslkIMDYSLLvGiHdidrgcqgsee ++ly++s+sk++L+++i+ D++fL+s++I+DYSLLvG++d+++ mKIAA0981 2005 NPLYIRSHSKSVLRTSIHSDAHFLSSHLIIDYSLLVGRDDTSN------- 2047 eeeesydkseaeegsddeepekqgktlsaspdrsSvamasckpmRgsvls mKIAA0981 - -------------------------------------------------- - eysltstsvesilasfrnlgriefgenipagairarrqreedgeesgkas mKIAA0981 - -------------------------------------------------- - lefeegedlvLYlGIIDILqdYdlkKKlEHawKSlqhdgGkGktISvvnP L++GIID++++++++KKlE+++KS++++gG+Gk+++vv+P mKIAA0981 2048 ---------ELVVGIIDYIRTFTWDKKLEMVVKSTGILGGQGKMPTVVSP 2088 efYskRFldFmskif<-* e+Y++RF+++m+k+f mKIAA0981 2089 ELYRTRFCEAMDKYF 2103 //