hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg09869/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0975  ( 1480 res)   mbg09869

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PX       PhoX homologous domain, present in p47phox a   102.9    3.7e-26   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PX         1/1      61   165 ..     1   142 []   102.9  3.7e-26

Alignments of top-scoring domains:
PX: domain 1 of 1, from 61 to 165: score 102.9, E = 3.7e-26
                   *->dniaivavveeetsgkkrgdgkhyyyvieietstnedveewtvyRRY
                      ++ +++ vv+ e      + + +++yvi+++ ++    +ewt+++RY
   mKIAA0975    61    EPAKEARVVGSE------LVDTYTVYVIQVTDGN----HEWTIKHRY 97   

                   sdFleLhskLlkkfpqekrrriiPplPekkllgryreraekesmkvkksl
                   sdF++Lh+kL ++++     +    lP+kk++g+                
   mKIAA0975    98 SDFHDLHEKLVAERK-----IDKSLLPPKKIIGK---------------- 126  

                   nnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess<-*
                     +s++++ekR r+Le YLq+ll   + ++      v+++FL+++   
   mKIAA0975   127 --NSRSLVEKRERDLEVYLQTLLTTFPDVA----PRVLAHFLHFH    165  

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