hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm12282/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0971  ( 610 res)   mpm12282

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
FAST_Leu-rich FAST kinase leucine-rich                  249.3    5.4e-71   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
FAST_Leu-rich   1/1     435   594 ..     1   184 []   249.3  5.4e-71

Alignments of top-scoring domains:
FAST_Leu-rich: domain 1 of 1, from 435 to 594: score 249.3, E = 5.4e-71
                   *->iakiLlpFgrLNYvyKPpnaeeflskleevLtrelhtlsqYPeslvd
                      i++iL+++++LN+v+K++n +efl++l+++Lt++lh++s  +esl++
   mKIAA0971   435    IVSILHVYSSLNHVHKIHN-REFLEALASALTGCLHHIS--SESLLN 478  

                   lvwSLclleyfPealLnqvlspgFiqrllgsksvlyaskdarvlqkLlqL
                   +v+S+c+++yfP+a++nq++++++i++ll+s +      ++++++kL+ L
   mKIAA0971   479 AVHSFCMMNYFPLAPINQLIKENIINELLTSGD------TEKNIHKLHVL 522  

                   nttvkLEcPeYkgPlLptryqvpsflqpliklrepldlsskkevaetLFL
                   nt++kL++++Yk++++p +++++s++qp            ++++ae+   
   mKIAA0971   523 NTCLKLDESTYKSVHIPLPQLPLSASQP------------NEKLAEV--- 557  

                   LkqLLGgenkfslnVltPygyviDfEihlDangnpLP<-*
                   L++LL+ge++fs+nV++P++y+iDfEi++D+n+++++   
   mKIAA0971   558 LSRLLEGEGRFSRNVPLPHNYHIDFEIRMDTNRTQVF    594  

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