hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mic/mic02056/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0969  ( 1106 res)   mic02056

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     77.6    1.6e-18   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      97   217 ..     1    82 []    77.6  1.6e-18

Alignments of top-scoring domains:
PH: domain 1 of 1, from 97 to 217: score 77.6, E = 1.6e-18
                   *->vikeGwLlkks...k.swkkryfvLfngvLlyyksk...kpkgsipL
                      v+k GwL+k+ +++ ++w kr+fvL +++L+yyk++++++  gsipL
   mKIAA0969    97    VTKAGWLYKQAssgVkQWNKRWFVLVDRCLFYYKDEkqeSILGSIPL 143  

                   sgcsvre.p...........cFeivt.dr...................tl
                    + +v    ++++ ++++    +++  d+ + ++++  +++ ++ + +t+
   mKIAA0969   144 LSFRVAAvQpsdnisrkhtfKVTVHWvDEagassthclspqaehagvrTY 193  

                   llqAeseeereeWvealqsaiaka<-*
                   +++Aes+ee+e W++a+ +a++ +   
   mKIAA0969   194 FFSAESPEEQEAWIQAMGEAARVQ    217  

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