hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj01140/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0957  ( 713 res)   mfj01140

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
ANK      ankyrin repeats                                162.4    4.7e-44   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
ANK        1/8      10    39 ..     1    30 []     7.6  4.5e+02
ANK        2/8      42    71 ..     1    30 []    39.8  3.6e-07
ANK        3/8      75   104 ..     1    30 []    15.8      6.1
ANK        4/8     108   137 ..     1    30 []    28.5  0.00089
ANK        5/8     141   170 ..     1    30 []    15.7      6.6
ANK        6/8     174   203 ..     1    30 []    31.6  0.00011
ANK        7/8     207   236 ..     1    30 []    31.8  9.5e-05
ANK        8/8     240   269 ..     1    30 []     4.7  1.1e+03

Alignments of top-scoring domains:
ANK: domain 1 of 8, from 10 to 39: score 7.6, E = 4.5e+02
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                           L +Aa++g+ e v  L++kga + +   
   mKIAA0957    10    ALSERLLIAAYKGQTENVVQLINKGAKVAV    39   

ANK: domain 2 of 8, from 42 to 71: score 39.8, E = 3.6e-07
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +GrTpLHlAa +g+l+vv++Ll++g d+++   
   mKIAA0957    42    HGRTPLHLAANKGHLSVVQILLKAGCDLDV    71   

ANK: domain 3 of 8, from 75 to 104: score 15.8, E = 6.1
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       ++T+LH A   gn e++ +L+++g  ++    
   mKIAA0957    75    GDQTALHRATVVGNTEILTALIREGCALDR    104  

ANK: domain 4 of 8, from 108 to 137: score 28.5, E = 0.00089
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      dG+T+LH Aa +g    +klL+++ga++ a   
   mKIAA0957   108    DGNTALHEAAWHGFSQSAKLLVKAGANVLA    137  

ANK: domain 5 of 8, from 141 to 170: score 15.7, E = 6.6
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LHlA++n +    ++Ll  g   ++   
   mKIAA0957   141    AGNTALHLACQNSHSQSTRILLLGGSRADL    170  

ANK: domain 6 of 8, from 174 to 203: score 31.6, E = 0.00011
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH+Aa++++l+vv+lLl++  ++++   
   mKIAA0957   174    AGDTCLHVAARYNHLSVVRLLLNAFCSVHE    203  

ANK: domain 7 of 8, from 207 to 236: score 31.8, E = 9.5e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH+Aa+ ++++vvk Ll++gad ++   
   mKIAA0957   207    AGDTALHVAAALNHKKVVKVLLEAGADTTI    236  

ANK: domain 8 of 8, from 240 to 269: score 4.7, E = 1.1e+03
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+TpL  A +++n+ev+ lL ++   +     
   mKIAA0957   240    AGQTPLETARYHNNPEVALLLTKAPQILRF    269  

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