hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm12246/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0956  ( 1210 res)   mpm12246

Scores for sequence family classification (score includes all domains):
Model        Description                                Score    E-value  N 
--------     -----------                                -----    ------- ---
Hydrolase    haloacid dehalogenase-like hydrolase        32.8    7.6e-06   1
E1-E2_ATPase E1-E2 ATPase                              -113.4       0.03   1

Parsed for domains:
Model        Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------     ------- ----- -----    ----- -----      -----  -------
E1-E2_ATPase   1/1     128   398 ..     1   245 []  -113.4     0.03
Hydrolase      1/1     436   876 ..     1   183 []    32.8  7.6e-06

Alignments of top-scoring domains:
E1-E2_ATPase: domain 1 of 1, from 128 to 398: score -113.4, E = 0.03
                   *->villivllnatlefyq...esrAekAleaLkklvpptAtVlRdGgke
                       ++++++++a+ + y++  + ++ + +          + V+R G ++
   mKIAA0956   128    PLFFVITVTAIKQGYEdwlRHNSDNEVNG------APVYVVRSG-GL 167  

                   eeipaeeLvpGDiVevkpGdrVPADgrvvege....stLkVDESaLTGE.
                   ++  ++ +++GDiV+++  ++ PAD++++++++ ++s + V  ++L GE+
   mKIAA0956   168 VKTRSKNIRVGDIVRIAKDEIFPADLVLLSSDrldgS-CHVTTASLDGEt 216  

                   ......SlPVeKhsdvvtp...............................
                   + +++ S+P + +  +v + ++     + ++++ +  +  ++   +++ +
   mKIAA0956   217 nlkthvSVPETAVLQTVANldsliaviecqqpeadlyrfmgrmiitqqme 266  

                   .dnp.lergnmVfaGTlvvsG.sltgvVtatGddTflgkIakLVeeAqss
                   + + +l++ +++  G   ++ +++ gv++ tG++T ++      +  q++
   mKIAA0956   267 eIVRpLGPESLLLRGARLKNTkEIFGVAVYTGMETKMA--LNYKSKSQKR 314  

                   ktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswleg....
                       ++ ++ f      + li+ +  +ii  ++      +++w   ++ +
   mKIAA0956   315 S-AVEKSMNTF----LIIYLIILISEAIISTIL------KYTWQAEekwd 353  

                   ................llyalifavallVa...AcPegLplvvtvalalG
                   ++  +++++++++++++l  +   +a+lV  +  +P+ L           
   mKIAA0956   354 epwynqktehqrnsskILRFISDFLAFLVLynfIIPISL----------- 392  

                   tgrmAkkgaLVKglpAvEt<-*
                                   vE+   
   mKIAA0956   393 -------------YVTVEM    398  

Hydrolase: domain 1 of 1, from 436 to 876: score 32.8, E = 7.6e-06
                   *->ikavvFDkDGTLtdgk...............................
                      +  v+ Dk+GTLt+ + + ++ + ++ + ++ +++  ++++++++++
   mKIAA0956   436    VEYVFTDKTGTLTENEmqfrecsinglkyqeingklvpegpspdste 482  

                   ..................................................
                   ++ +  ++ ++ +++ + + ++ +++++++++  ++++   +  +  ++ 
   mKIAA0956   483 gevpflgslshlsnsahltatslrtspesetelikehdlffkavslchtv 532  

                   ............................eppiaeaiveaaaelgl....l
                   + ++ ++++ ++++ +++  + + +   + p ++a+veaaa++g+   ++
   mKIAA0956   533 qisnvqtdgigdgpwqpnlapaqleyyaSSPDEKALVEAAARAGIifvgI 582  

                   pleevekllgrgl.g...erilleggltaell..................
                   ++e +e  +++ l++ + + il++  +++++      +++++    ++ +
   mKIAA0956   583 SEETMEVKVLGRLeRyklLHILEFDSDRRRMSvivqapsgekllfakgae 632  

                   ..................................................
                   ++  ++  +++  +++ + ++   ++ ++     +  + ++ ++ +++  
   mKIAA0956   633 ssilpkciggeiaktrihvdefalkglrtlciayrqftakeyedvdrrlf 682  

                   ......................d.evlglial.dklypgarealkaLker
                   + ++   +++++  +     ++d  +lg+ a++d+l + +re+++aL+ +
   mKIAA0956   683 eartalqhreekladafqyiekDlILLGATAVeDRLQDKVRETIEALRMA 732  

                   GikvailTggdr.naeallealgla.lfdvivdsddvggvgpivvgKPkp
                   Gikv++lTg+ +++a+       +   ++++      +   ++++ K + 
   mKIAA0956   733 GIKVWVLTGDKHeTAVS------VSlSCGHFHRTMNIL---ELINQKSDS 773  

                   eifllalerlgvkpeevg................................
                    +++++++ ++   e   +  +++   ++++ +   +++++   +  ++ 
   mKIAA0956   774 GCAEQLRQLARRITE--Dhviqhglvvdgtslslalreheklfmevcrnc 821  

                   .........................pe.vlmvGDgvnDapalaaAGvgva
                   +     +  + ++ +  +  + +++   +l+vGDg nD+ ++  A+vg+ 
   mKIAA0956   822 savlccrmaplqkakvirlikispeKPiTLAVGDGANDVSMIQEAHVGIG 871  

                   mgngg<-*
                   +       
   mKIAA0956   872 IMGKE    876  

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