hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg02576/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0952  ( 547 res)   mbg02576

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac        91.5    9.8e-23   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1     145   245 ..     1   114 []    91.5  9.8e-23

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 145 to 245: score 91.5, E = 9.8e-23
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       Dv +vvg  +g+     ++++   Hk+vLa     S++F+a+f+++
   mKIAA0952   145    ADVHFVVGPPGGT-----QRLPG--HKYVLAVG---SSVFHAMFYGe 181  

                   .......ieldDeallievspeaFralLnflYt.kldlpeedvenveelL
                     +++++i ++D      v p aF a+L+++Y++++dl  +   +v+  L
   mKIAA0952   182 laedkdeIRIPD------VEPAAFLAMLKYIYCdEIDLAAD---TVLATL 222  

                   elAdfldSYGqip.lvelCeefllknl<-*
                   ++A+++    ++p+l+++C +fl+++l   
   mKIAA0952   223 YAAKKY----IVPhLARACVNFLETSL    245  

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