hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbh/mbh04274/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0943  ( 266 res)   mbh04274

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Peptidase_C54 Peptidase family C54                       99.8    5.4e-26   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Peptidase_C54   1/1       1   210 [.     1   423 []    99.8  5.4e-26

Alignments of top-scoring domains:
Peptidase_C54: domain 1 of 1, from 1 to 210: score 99.8, E = 5.4e-26
                   *->esgleaFlsDvySRIWfTYRrgFppIARdkDspaslalaLlvrikdf
                                                                     
   mKIAA0943     -    ----------------------------------------------- -    

                   iagdtglTtDcGWGCMlRtGQMLLAqALiilhLGRdWrwprekrshvAas
                                            ++L ++  G                
   mKIAA0943     1 -------------------------NCLNCHCCGVML------------- 12   

                   ddeddfdkedeeykkIlawFgDssSpdapFSIHqlVqmGaslcGKkapGe
                                                           +l  K+  G 
   mKIAA0943    13 ----------------------------------------ML-YKA-HG- 19   

                   WfGPnavarilkkLvkedaerhpdwsglavyValDgtvvydDivekcnns
                       +  a++ +kL+ +d     +ws+lav+ a+D+tvv ++i ++c   
   mKIAA0943    20 ----SVLAFC-RKLAVFD-----TWSSLAVHIAMDNTVVMEEIRRLC--- 56   

                   ntedavklIqqklqllrekrkirkNldknvkylkpvkfvgapvlaidfat
                                                  +l +   ++ p     + +
   mKIAA0943    57 -----------------------------RANLPCAGAAALP----TDSE 73   

                   nsnqdknsraesgkneqVgqseWkplLLLiPlRLGidkiNpvYieaLkel
                     +  ++  ae +      +s+W+pl LLiPlRLG+++iN+ Y+e Lk +
   mKIAA0943    74 RHCNGFPAGAEVTNR----PSAWRPLVLLIPLRLGLTDINEAYVETLKHC 119  

                   lslpqSvGIiGGkPnqSlYFvGfqgDeliYLDPHyvQeavdvnqkdfpad
                   + +pqS+G iGGkPn+++YF+G++g eliYLDPH++Q+av+ + + f   
   mKIAA0943   120 FMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVELTDSCFI-P 168  

                   ddsdkkkdkkaaeleelvklwiQiadvttktddeedeTyHcksl.rklsf
                   d                                   e++Hc+++++++ +
   mKIAA0943   169 D-----------------------------------ESFHCQHPpSRMGI 183  

                   sdMDPSlaiGFlCrdedDFdnlcerlk<-*
                    ++DPS a+GF+C+ e+DF+++c ++k   
   mKIAA0943   184 GELDPSIAVGFFCKKEEDFNDWCQQVK    210  

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