hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mbr/mbr03067/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0919  ( 270 res)   mbr03067

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Sec15    Exocyst complex subunit Sec15-like             421.2   9.3e-123   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sec15      1/1       1   266 [.     1   399 []   421.2 9.3e-123

Alignments of top-scoring domains:
Sec15: domain 1 of 1, from 1 to 266: score 421.2, E = 9.3e-123
                   *->eYekvilkCWmKEGEHFpfqdselepqpFPkkfPFSpmVPdvCtqaK
                                                                     
   mKIAA0919     -    ----------------------------------------------- -    

                   eFiyaslkFlsdlhlsetevddNvvrKyldlLLtrvLsevLksliskpsi
                                        +                    s+i++++i
   mKIAA0919     1 --------------------HA--------------------SVIKRKNI 10   

                   glsQlvQIiiNltyLEkAckylerFithltnieqrtvetsrSnnVlsles
                   gl++lvQIiiN+t+LEk+ckyle+Fit++tn+ ++tv+t++    l+  +
   mKIAA0919    11 GLTELVQIIINTTHLEKSCKYLEEFITNITNVLPETVHTTK----LY--G 54   

                   lkvLkdaRkaAEkeiiekinsKIDeFleLaeNyDWtttevpqdaseYinD
                   ++++kdaR+aAE+ei++++n+KID+Fl+La+ yDW+t +++++as+Y++D
   mKIAA0919    55 TTTFKDARHAAEEEIYTNLNQKIDQFLQLAD-YDWMTGDLDNKASDYLVD 103  

                   liiyLettfssflqnLPkkvaqtvcrrtldHlstsivdlLlddevKqist
                   li++L++tf++f+ +LP+kvaqt+c+++++Hl+ts+++lLl++ev+q+++
   mKIAA0919   104 LIAFLRSTFAVFT-HLPGKVAQTACMSACKHLATSLMQLLLEAEVRQLTL 152  

                   gAleqfnlDVrqlEsFaasRYhifppvpGTiDSNgyqePmTPSTPTFPNA
                   gAl+qfnlDVr++E+Fa+s     +pvp      g+qe            
   mKIAA0919   153 GALQQFNLDVRECEQFARS-----GPVP------GFQE------------ 179  

                   NGVDAPTLFENNigtLskaFielRQLldLLlssdwetYlapygrernKYn
                                +tL++aFi+lRQLldL++++dw+tYla+yg++++KY+
   mKIAA0919   180 -------------DTLQLAFIDLRQLLDLFIQWDWSTYLADYGQPNCKYL 216  

                   rvqpekaitlLEKmkdfskkifgffglrksklnNdkkKlldtvakqLksl
                   rv+p +a+tlLEKmkd+s+k+++f+++rk+++  dk+Kl+dtvakqL++l
   mKIAA0919   217 RVNPVTALTLLEKMKDTSRKNNMFAQFRKNER--DKQKLIDTVAKQLRGL 264  

                   ei<-*
                   ++   
   mKIAA0919   265 IS    266  

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