hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/smart.HMMs Sequence file: /cdna4/rodent/full/goal/mbg/mbg06264/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0910 ( 1584 res) mbg06264 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- IPPc Inositol polyphosphate phosphatase, catalyti 602.6 1.4e-176 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- IPPc 1/1 541 884 .. 1 435 [] 602.6 1.4e-176 Alignments of top-scoring domains: IPPc: domain 1 of 1, from 541 to 884: score 602.6, E = 1.4e-176 *->rdikvlvgTwNvngqf.krseadpkvdvtswLfqkid....kedevk ++i+v+vgTwNvng++++rs+a++++++t+wL + ++ + +e+++k mKIAA0910 541 KKIRVCVGTWNVNGGKqFRSIAFKNQTLTDWLLDAPKlagiQEFQDK 587 qsekpDiyviGlQEvggkkyeesilqvdkivkellsnalkkkillrsfel +s+++Di++iG++E+ +el mKIAA0910 588 RSKPTDIFAIGFEEM--------------------------------VEL 605 eagsilesiaakerlWsellesslnevsgksqynvlaserelvgilllvf +ag+i+++ +++++lW+ +l++++ s++++y++lase+ lvg++l+vf mKIAA0910 606 NAGNIVNASTTNQKLWAVELQKTI---SRDNKYVLLASEQ-LVGVCLFVF 651 vkanelkkikdvevktvktGmggltGnKGavaVrfklhdtEgqysfcfVN ++++++++i+dv+v+tvktGmgg tGnKGava+r+++h+t s+cfV+ mKIAA0910 652 IRPQHAPFIRDVAVDTVKTGMGGATGNKGAVAIRMLFHTT----SLCFVC 697 sHLaagesNLanveqRnqdYktIrlralsFperketsqrnrflevgkdnI sH+aag+s +v++Rn+d+ +I +r+lsFp++++ + mKIAA0910 698 SHFAAGQS---QVKERNEDFVEI-ARKLSFPMGRM--------------L 729 ldhdvvFWfGDLNyRldspsylevlvadaeqqtvlAddlnliaaeldvir ++hd+vFW+GD+NyR+d+p+ mKIAA0910 730 FSHDYVFWCGDFNYRIDLPN------------------------------ 749 kvseevrrkIskkekevfdeLlekdQLnrqkeagkvFkgFqEgkIkFpPT eev+++I++++ +d+L++ dQL +qk+ag++F+gF Egk++F+PT mKIAA0910 750 ---EEVKELIRQQN---WDSLIAGDQLINQKNAGQIFRGFLEGKVTFAPT 793 YKydredsvgtetYDtsEKkRvPAWcDRILyrs.Krqf.eaapnliqlse YKyd ++e+YDtsEK+R+PAW+DR+L+r++K++f+++a++l++l++ mKIAA0910 794 YKYD----LFSEDYDTSEKCRTPAWTDRVLWRRrKWPFdRSAEDLDLLNA 839 syfpvvssiyqeekvvtyyysgmelttSDHkPVfAtFrlkvkkvd<-* s++++++++y+++++++++y ++el+tSDH+PV+A++++++++v+ mKIAA0910 840 SFQDESKILYTWTPGTLLHYGRAELKTSDHRPVVALIDIDIFEVE 884 //