hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mtg/mtg01159/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0906  ( 1884 res)   mtg01159

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Big_2    Bacterial Ig-like domain (group 2)              55.0    1.7e-12   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Big_2      1/1    1075  1150 ..     1    89 []    55.0  1.7e-12

Alignments of top-scoring domains:
Big_2: domain 1 of 1, from 1075 to 1150: score 55.0, E = 1.7e-12
                   *->avtsvtvsptntvslakGatlqlkatvtpsdasnkdiTkkvtWsSsn
                      ++   +++p  +v+l  Ga +q ++++ p+ +sn        +s+ n
   mKIAA0906  1075    VFPPFRLIPR-KVTLIIGAMMQITSEGGPQPQSN------ILFSINN 1114 

                   psvAtVsntnSgstGlVtalakGtatItatsgdgnksasvtv<-*
                   +svA Vs     s+GlV++l +G++ +  +++  ++  + +v   
   mKIAA0906  1115 ESVAAVS-----SSGLVRGLMVGNGSVLGVVQA-VDAETGKV    1150 

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