hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mie/mie07019/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0873  ( 503 res)   mie07019

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BAG      BAG domains, present in regulator of Hsp70 p   335.0      5e-96   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BAG        1/4      65   142 ..     1    91 []    84.6  1.2e-20
BAG        2/4     238   316 ..     1    91 []    87.8  1.3e-21
BAG        3/4     331   406 ..     1    91 []    75.9    5e-18
BAG        4/4     421   498 ..     1    91 []   103.9  1.8e-26

Alignments of top-scoring domains:
BAG: domain 1 of 4, from 65 to 142: score 84.6, E = 1.2e-20
                   *->siakinevlgeVlKlerkieqevqssdfdgkkddkeylmlsElLmkl
                      si++++e++ eV    + ie +v    f+g +ddk+y++l+++L+k+
   mKIAA0873    65    SISRLQEIQREV----KAIEPQVVG--FSGLSDDKNYKRLERILTKQ 105  

                   LlkLDsmlvdvegraEslaediReaRKrlvreiqklLkklDslk<-*
                   L+++Ds  vd+eg+      di++aRKr+++e+++lLk+l++++   
   mKIAA0873   106 LFEIDS--VDTEGK-----GDIQQARKRAAQETERLLKELEQNA    142  

BAG: domain 2 of 4, from 238 to 316: score 87.8, E = 1.3e-21
                   *->siakinevlgeVlKlerkieqevqssdfdgkkddkeylmlsElLmkl
                      s+akin v++eV+K+ r+ + ++++    g + ++++++ls++L +l
   mKIAA0873   238    SVAKINSVMCEVNKA-RGTLIALLM----GVDSSETCRHLSCVLSGL 279  

                   LlkLDsmlvdvegraEslaediReaRKrlvreiqklLkklDslk<-*
                   + +LD+   dv+gr     ++iR++R+++v++i+klLk+lD+++   
   mKIAA0873   280 IADLDA--LDVCGR-----TEIRNYRREVVEDINKLLKYLDLEE    316  

BAG: domain 3 of 4, from 331 to 406: score 75.9, E = 5e-18
                   *->siakinevlgeVlKlerkieqevqssdfdgkkddkeylmlsElLmkl
                      si ki++vl+++    r+i++e+++    ++++ ++yl+ +++L++l
   mKIAA0873   331    SIIKIENVLKRM----REIKNELLQ----AQSPPELYLRAKTELQGL 369  

                   LlkLDsmlvdvegraEslaediReaRKrlvreiqklLkklDslk<-*
                   + +LD+  v +e++     ++iReaR+r+v e+q l+++lD+++   
   mKIAA0873   370 IGQLDE--VSLEKN-----PCIREARRRAVIEVQILITYLDLKE    406  

BAG: domain 4 of 4, from 421 to 498: score 103.9, E = 1.8e-26
                   *->siakinevlgeVlKlerkieqevqssdfdgkkddkeylmlsElLmkl
                       +++++e+lg++     +i+ ev+s  f g+++dk+y +l+ElL+k+
   mKIAA0873   421    PHKAVWEILGNL----SEILGEVLS--FGGNRTDKNYIRLEELLTKQ 461  

                   LlkLDsmlvdvegraEslaediReaRKrlvreiqklLkklDslk<-*
                   Ll+LD+  vd++g+     e+++ aRK++v++ q++L++lD ++   
   mKIAA0873   462 LLALDA--VDPQGE-----EKCKAARKQAVKLAQNILSYLDMKS    498  

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