hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mie/mie07019/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0873  ( 503 res)   mie07019

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BAG      BAG domain                                     341.4    9.9e-99   4

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BAG        1/4      65   142 ..     1    90 []    86.3  6.2e-22
BAG        2/4     238   316 ..     1    90 []    89.2  8.1e-23
BAG        3/4     331   406 ..     1    90 []    78.8  1.1e-19
BAG        4/4     421   498 ..     1    90 []   104.3  2.3e-27

Alignments of top-scoring domains:
BAG: domain 1 of 4, from 65 to 142: score 86.3, E = 6.2e-22
                   *->siakinevlgeVlKlvrkieqevqssdadgkkddkeylrlsElLmkl
                      si++++e++ eV    + ie +v    ++g +ddk+y+rl+++L+k+
   mKIAA0873    65    SISRLQEIQREV----KAIEPQVVG--FSGLSDDKNYKRLERILTKQ 105  

                   LlkLDsmvdvegnaEslaediReaRKrlvrkiqalLeklDskk<-*
                   L+++Ds vd+eg+      di++aRKr+++++++lL++l++++   
   mKIAA0873   106 LFEIDS-VDTEGK-----GDIQQARKRAAQETERLLKELEQNA    142  

BAG: domain 2 of 4, from 238 to 316: score 89.2, E = 8.1e-23
                   *->siakinevlgeVlKlvrkieqevqssdadgkkddkeylrlsElLmkl
                      s+akin v++eV+K+ r+ + ++++    g + ++++++ls++L +l
   mKIAA0873   238    SVAKINSVMCEVNKA-RGTLIALLM----GVDSSETCRHLSCVLSGL 279  

                   LlkLDsmvdvegnaEslaediReaRKrlvrkiqalLeklDskk<-*
                   + +LD+ +dv+g+     ++iR++R+++v++i++lL++lD+++   
   mKIAA0873   280 IADLDA-LDVCGR-----TEIRNYRREVVEDINKLLKYLDLEE    316  

BAG: domain 3 of 4, from 331 to 406: score 78.8, E = 1.1e-19
                   *->siakinevlgeVlKlvrkieqevqssdadgkkddkeylrlsElLmkl
                      si ki++vl+++    r+i++e+++    ++++ ++ylr +++L++l
   mKIAA0873   331    SIIKIENVLKRM----REIKNELLQ----AQSPPELYLRAKTELQGL 369  

                   LlkLDsmvdvegnaEslaediReaRKrlvrkiqalLeklDskk<-*
                   + +LD+ v +e+n     ++iReaR+r+v ++q l+++lD+k+   
   mKIAA0873   370 IGQLDE-VSLEKN-----PCIREARRRAVIEVQILITYLDLKE    406  

BAG: domain 4 of 4, from 421 to 498: score 104.3, E = 2.3e-27
                   *->siakinevlgeVlKlvrkieqevqssdadgkkddkeylrlsElLmkl
                       +++++e+lg++     +i+ ev+s  + g+++dk+y rl+ElL+k+
   mKIAA0873   421    PHKAVWEILGNL----SEILGEVLS--FGGNRTDKNYIRLEELLTKQ 461  

                   LlkLDsmvdvegnaEslaediReaRKrlvrkiqalLeklDskk<-*
                   Ll+LD+ vd++g+     e+++ aRK++v++ q++L++lD k+   
   mKIAA0873   462 LLALDA-VDPQGE-----EKCKAARKQAVKLAQNILSYLDMKS    498  

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