hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mtg/mtg01789/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0866 ( 1984 res) mtg01789 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- Myosin_head Myosin head (motor domain) 1436.5 0 1 Myosin_tail_1 Myosin tail 787.7 4.3e-233 1 Myosin_N Myosin N-terminal SH3-like domain 76.3 6.5e-19 1 IQ IQ calmodulin-binding motif 22.6 0.0093 1 LMP LMP repeated region -23.7 0.45 1 DUF164 Uncharacterized ACR, COG1579 -77.7 0.77 1 SF-assemblin SF-assemblin/beta giardin -93.2 0.97 1 Filament Intermediate filament protein -177.3 0.18 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Myosin_N 1/1 45 89 .. 1 47 [] 76.3 6.5e-19 Myosin_head 1/1 99 783 .. 1 795 [] 1436.5 0 IQ 1/1 799 819 .. 1 21 [] 22.6 0.0093 SF-assemblin 1/1 1003 1232 .. 1 248 [] -93.2 0.97 DUF164 1/1 1030 1261 .. 1 235 [] -77.7 0.77 Filament 1/1 1555 1874 .. 1 359 [] -177.3 0.18 Myosin_tail_1 1/1 1085 1942 .. 1 863 [] 787.7 4.3e-233 LMP 1/1 1777 1945 .. 1 158 [] -23.7 0.45 Alignments of top-scoring domains: Myosin_N: domain 1 of 1, from 45 to 89: score 76.3, E = 6.5e-19 *->KknVWVpDekegfikgeIkesteGdkVtVktedtsGktvtvkkDdvq Kk+VWVp+ek+gf++++Ik +++Gd+V+V+++++ Gk+vtv kDd+q mKIAA0866 45 KKLVWVPSEKQGFEAASIK-EEKGDEVVVELVEN-GKKVTVGKDDIQ 89 <-* mKIAA0866 - - Myosin_head: domain 1 of 1, from 99 to 783: score 1436.5, E = 0 *->veDlveLtylnEpsvLhNLkkRYtsgdlIYTYsGlvLvsvNPYkrlp veD++eLt+lnE+svLhNL++RY+ ++lIYTYsGl++v+vNPYk lp mKIAA0866 99 VEDMAELTCLNEASVLHNLRERYF-SGLIYTYSGLFCVVVNPYKYLP 144 iYteeiiakYrGkrrgElpPHiFAiAdeAYRsMlsdkeNQsIlisGESGA iY+e+i+++Y+Gk+r+E+pPHi+AiAd AYRsMl+d+e+QsIl++GESGA mKIAA0866 145 IYSEKIVDMYKGKKRHEMPPHIYAIADTAYRSMLQDREDQSILCTGESGA 194 GKTEntKkvmqYlAsvsgstpkvesaevtpnkeegsledqiLqsNPiLEA GKTEntKkv+qYlA v++s+++++ +++++g+le+q+Lq+NPiLEA mKIAA0866 195 GKTENTKKVIQYLAVVASSHKGKK-----DSSITGELEKQLLQANPILEA 239 FGNAKTtRNNNSSRFGKfieIqFdatGsiNvTlvGgkIetYLLEKSRVvy FGNAKT++N+NSSRFGKfi+I+Fd tG i vG++IetYLLEKSR ++ mKIAA0866 240 FGNAKTVKNDNSSRFGKFIRINFDVTGYI----VGANIETYLLEKSRAIR 285 QtegERNFHIFYQLLagasaqeekkeLkLtspadpkdYaYLnqsgTynPc Q+ +ER+FHIFY+LLaga +++ k +L+L+s ++Y +L++ g mKIAA0866 286 QARDERTFHIFYYLLAGAKEKM-KSDLLLES---FNSYTFLSN-G----F 326 ytvyrrDdgiDDaeeFkdtrkAlkiiGftdeeqrsifrilAAILhLGNie +++ + + D+e+F++t++A+ i+Gf++eeq+ i+++++++L+LGNi mKIAA0866 327 VPI----PAAQDDEMFQETLEAMSIMGFNEEEQLAILKVVSSVLQLGNIV 372 GFkqdqatTGkeeqAGvtvsedteealeiiaeLLGvDaeeLekaLlsrri Fk+++ +++qA +++d+++ ++++++L G++++++++a+l++ri mKIAA0866 373 -FKKER----NTDQA---SMPDNTA-AQKVCHLVGINVTDFTRAILTPRI 413 ktGgggkrretvtkpqnveqAryaRDALAKaiYsRLFdWiVekiNkaLsa k+G r++v+k+q++eqA +a++ALAKa Y+RLF Wi +++NkaL++ mKIAA0866 414 KVG-----RDVVQKAQTKEQADFAIEALAKATYERLFRWILSRVNKALDK 458 keQasdSrGGqaaegdDTVSITVVdlPraaldkranfIGvLDIyGFEIFa + + + a+f G+LDI+GFEIF mKIAA0866 459 TH---R--------------------------QGASFLGILDIAGFEIF- 478 ekNSFEQLcINYvNEKLQQfFNhhmFklEQEEYkrEgIeWtfIdyglDnq e+NSFEQLcINY+NEKLQQ+FNh+mF+lEQEEY+rEgIeW fId+glD+q mKIAA0866 479 EVNSFEQLCINYTNEKLQQLFNHTMFILEQEEYQREGIEWNFIDFGLDLQ 528 acidLIEkKmkPpGIlslLDEeCrfPkatDqtFldKLlqtfsskhprlth +ci+LIE + +PpG+l+lLDEeC+fPkatD++F++KL++ ++hp + mKIAA0866 529 PCIELIERPNNPPGVLALLDEECWFPKATDKSFVEKLCSEQ-GNHP---K 574 FaqkpgrfkkgksrqgkteFiikHYAGdVeYnaegfleKNkDpLfddlis F qkp ++ ++kteF+i HYAG+V+Yna+++l KN+DpL+d++ s mKIAA0866 575 F-QKP-KQ-----LKDKTEFSIIHYAGKVDYNASAWLTKNMDPLNDNVTS 617 llksSsdvpllaeLFpeeelseaAnrrnkapdfeadfdeeeaaaksaklg ll +Ssd +++a+L++++ + +++ak+++++ mKIAA0866 618 LLNASSD-KFVADLWKDVDR----------------IVGLDQMAKMTESS 650 sgkgksgkkknfleTvgsqfkeslgeLmktLsstAnlnPHfvRCIKPNek ++ ++kk++f +Tvg ++ke+lg+Lm+tL++t +P+fvRCI+PN++ mKIAA0866 651 LPSASKTKKGMF-RTVGQLYKEQLGKLMTTLRNT---TPNFVRCIIPNHE 696 KkagqFDaslVlhQlrclGvLEigiRirraGFPnRitfdeFlqRYrlLap K+ g++Da lVl+Qlrc+GvLE giRi+r+GFPnRi+f+eF+qRY++La+ mKIAA0866 697 KRSGKLDAFLVLEQLRCNGVLE-GIRICRQGFPNRIVFQEFRQRYEILAA 745 ktwpsgfrpkwvgdakkgceliLqslrqtpgnldkeeyrfGkTKiFfR<- +++p+gf +d+k++c l++++l +ld+++yr+G++KiFfR mKIAA0866 746 NAIPKGF-----MDGKQACILMIKAL-----ELDPNLYRIGQSKIFFR 783 * mKIAA0866 - - IQ: domain 1 of 1, from 799 to 819: score 22.6, E = 0.0093 *->rraaikIQaawRGylaRkryk<-* ++ ++ +Qa++RGylaRk++ mKIAA0866 799 TDVIMAFQAMCRGYLARKAFT 819 SF-assemblin: domain 1 of 1, from 1003 to 1232: score -93.2, E = 0.97 *->tgtaiKLeh....vsEkfsgfwtelEnEkqqRRvaeatRfqlikea. KL+++++ + E++s + t l E + ++ + + + e+ mKIAA0866 1003 DDQNSKLSKerklLEERVSDLTTNLAEEEEKAKNLTKLKSK--HESm 1047 iakLEKsleaEvKrRaESdkqiQehFesEikklqEriaeqvadmqaalkk i+ LE l E K R+E k ++ e+ + +E ia ++ a+lk mKIAA0866 1048 ISELEVRLKKEEKSRQELEK-LKRKLEGDASDFHEQIA-DLQAQIAELKM 1095 AvdsLserlndlhtnirnEreqrrsdIEhLatslvkkvNelvaaldeEri ++ e l+ + + +E++q+++++ + + +l + + +l+ ld Er+ mKIAA0866 1096 QLAKKEEELQAALARLDEEIAQKNNALKKIR-ELEGHISDLQEDLDSERA 1144 sRkqeesqilKkvaEdlarisakiDtEKntRe..aelsalrsEAihevlg R ++ EK R+ + el al +E ++++l mKIAA0866 1145 ARNKA---------------------EKQKRDlgEELEALKTE-LEDTLD 1172 nrnladEqFqnlVLdEiaalKealalEreERiaeDDeI....VQAvNDYT + E ++ E++ lK al+ E +a e ++++ QAv+ T mKIAA0866 1173 STATQQE-LRAKREQEVTVLKKALDEETRSHEAQVQEMrqkhTQAVEELT 1221 kALQdGLklVnk<-* L + k + mKIAA0866 1222 EQL-EQFKRAKA 1232 DUF164: domain 1 of 1, from 1030 to 1261: score -77.7, E = 0.77 *->mknelksLvkiqeidkeke.rLeerikeipk...eLkkakelle... ++ +k+L k+ +++++Le r+k+ +k+++eL+k+k le++ mKIAA0866 1030 EEEKAKNLTKLKSKHESMIsELEVRLKKEEKsrqELEKLKRKLEgda 1076 .alkkeveeleqekeelkeevkklekeiqeieeki.kkaEekmdeiktqr ++ +++ +l+ elk + +k e+e+q + +++++ + k + k+ r mKIAA0866 1077 sDFHEQIADLQAQIAELKMQLAKKEEELQAALARLdEEIAQKNNALKKIR 1126 EYkA........LerE...lqkakdkevtlrkeieqleeelkkieeeiee E++ + ++ +++L+ E+ ka+++ + l e+e l el+ + mKIAA0866 1127 ELEGhisdlqedLDSEraaRNKAEKQKRDLGEELEALKTELEDTLDSTAT 1176 lkeeilkqEkeleeeeeevelEvrkikekvlellskreelkektdedlls +e k E e + +++ +++E r + +v+e+ +k ++ +e++ e l mKIAA0866 1177 QQELRAKREQEVTVLKKALDEETRSHEAQVQEMRQKHTQAVEELTEQL-- 1224 fYERiiknkknl..viVPiennvCaGChiiLpsqfenkVrkePddivfCP E ++ k nl+++ ++e++ ++ ++ + r + + mKIAA0866 1225 --EQFKRAKANLdkSKQTLEKE---------NADLAGELRVL-GQAK--- 1259 yCSRILYyee<-* +e mKIAA0866 1260 --------QE 1261 Filament: domain 1 of 1, from 1555 to 1874: score -177.3, E = 0.18 *->nEKeqmQnLNDRLAsYIdKVRfLEqqNkeLevkieelrqkqsrggpa + K q+ +L D L ++ E ++ +Lev ++l+++ +r mKIAA0866 1555 EMKTQLEELEDEL-------QATEDAKLRLEVNMQALKGQFER---- 1590 svsrlyslYeteieeLRrqidqltnerarlqlEidnlrealedfrkKyed ++ ++ e+ ++L+rq+ + + e l+ E+ ++a++ +kK+e mKIAA0866 1591 DLQARDEQNEEKRRQLQRQLHEYETE---LEDERKQRALAAAA-KKKLEG 1636 KeDLaaQnqlkdlEialntkeaeLaTaL.eRqeaEndlvgLRaQiAklEs lkdlE+ +a ++R+ea +l++L+aQ mKIAA0866 1637 --------DLKDLELQA-------DSAIkGREEAIKQLRKLQAQMKD--- 1668 laaRkdlDeaTLarvD..............LEnkvEsLqEElaF...... ++lD+a +r + ++++++++ ++LE+ + LqE+la ++ ++ mKIAA0866 1669 --FQRELDDARASRDEifatskenekkaksLEADLMQLQEDLAAaerark 1716 LKknHeEEvk.eLqaqiqdtgqvnVEmDaarqqEwklD.....LtkaLrE + ++ EE+++eL ++++++ ++ D+ r +l+ + +L + L E mKIAA0866 1717 QADLEKEELAeELASSLSGR-NTLQ--DEKR----RLEariaqLEEELEE 1759 iRaQYEeiAeknrq...eaEewYksKleeLqtaaarngealrsaKeEitE + E++ ++ r+ + +aE+ + l+ +++a +n a ++ + ++E mKIAA0866 1760 EQGNMEAMSDRVRKatlQAEQL-SNELATERSTAQKNESARQQLERQNKE 1808 lRRqiQsLeiEL.qslksqnasLErqlaElEeryeaelaqyqalisqlEe lR +Q+ e +++ lks+ a+LE+++a lEe+ e e+++ qa+ +l + mKIAA0866 1809 LRSKLQEVEGAVkAKLKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQ 1858 eLqqlreEMarqLrEYQeLLdVKlaLDiEIATYRKLLEGEEsR<-* +l+e LL V E++R mKIAA0866 1859 KDKKLKE----------VLLQV-----------------EDER 1874 Myosin_tail_1: domain 1 of 1, from 1085 to 1942: score 787.7, E = 4.3e-233 *->dlerqkreleeqlkrkeselsqlslklEdEqalvaqLqkkikeleaR dl q el ql++ke+el++ ++l++E+a + + kki+ele mKIAA0866 1085 DLQAQIAELKMQLAKKEEELQAALARLDEEIAQKNNALKKIRELEGH 1131 IeELeEeLEaERaARaKaEkqRaDLsrELEeLsERLeEagGaTaaQiEln I++L+E+L++ERaAR+KaEkq++DL +ELE+L+ +Le+ ++Ta Q+El+ mKIAA0866 1132 ISDLQEDLDSERAARNKAEKQKRDLGEELEALKTELEDTLDSTATQQELR 1181 kKREaELaKLRrdLEEanlqhEealatLRKKHqdainElsdQieqLqKqK +KRE+E + L++ L E++ +hE+++ ++R KH++a++El++Q+eq +++K mKIAA0866 1182 AKREQEVTVLKKALDEETRSHEAQVQEMRQKHTQAVEELTEQLEQFKRAK 1231 akaEKeKsqlqaEvddlaaqldqiaKaKlnaEKkakqlEsqlsElqvKld a ++K K++l+ E++dla++l+ ++ aK++ E k k+lE+ql++lq+K+ mKIAA0866 1232 ANLDKSKQTLEKENADLAGELRVLGQAKQEVEHKKKKLEVQLQDLQSKCS 1281 ElqRqlnDltsqKsRLqsENsdLtrqleEaEaqvsqlsklKsqlesQLEe + +R++ +l+ + +Lq+E+++ t l EaE ++ l k ++l sQL + mKIAA0866 1282 DGERARAELSDKVHKLQNEVESVTGMLNEAEGKAIKLAKDVASLGSQLQD 1331 AkRslEEEsReRanLqaqlrnlehDlDslrEqlEEEsEAKaeleRqLsKa ++++l EE+R+++n +++lr+le + sl+ ql+EE EAK +leR +s mKIAA0866 1332 TQELLQEETRQKLNVSTKLRQLEDERNSLQDQLDEEMEAKQNLERHVSTL 1381 naeiqqwrsKfEsEgalraEElEElKkKlnqkisElEeaaEaanaKcssL n ++ ++K+ + a E++EE+Kk+l+++ + l ++ E+ a+ ++L mKIAA0866 1382 NIQLSDSKKKL-QDFASTIEVMEEGKKRLQKEMEGLSQQYEEKAAAYDKL 1430 EKtKsRLqsElEDlqievEranaaaseLEKKqknFDKilaEwKkkvdelq EKtK+RLq+El+Dl ++++ +++ +s+LEKKqk+FD++laE+K+++ + mKIAA0866 1431 EKTKNRLQQELDDLVVDLDNQRQLVSNLEKKQKKFDQLLAEEKNISSKYA 1480 aEletAqreaRnlstElfrlKneleElkDqvEaLrRENKnLqdEikDLtd E++ A+ eaR+++t++++l ++leE+++ +E L+R NK L+ E DL + mKIAA0866 1481 DERDRAEAEAREKETKALSLARALEEALEAKEELERTNKMLKAEMEDLVS 1530 qLgEgGRnvHELEKarRrLEaEkdELqaALeEAEaALeqeEsKvlRaqvE ++++ G+nvHELEK +R+LE + +E +++LeE+E+ L+++E+++lR++v+ mKIAA0866 1531 SKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQATEDAKLRLEVN 1580 lsqiRsEiERRLaEKEEEfEntRKnhqraiesLqasLaEaEaKgKaEalR +++++ ++ER+L++++E E++R+++qr++ + +++L E E+K++a a + mKIAA0866 1581 MQALKGQFERDLQARDEQNEEKRRQLQRQLHEYETEL-EDERKQRALAAA 1629 lKKKLEgdInELEiaLDhaNkanaeaqKnvKkyqqqvkeLQtqvEeeQRa KKKLEgd+++LE + D a k+++ea K+++k+q+q k+ Q+ ++++++ mKIAA0866 1630 AKKKLEGDLKDLELQADSAIKGREEAIKQLRKLQAQMKDFQRELDDARAS 1679 redareqlavaERRataLqaElEELrvaLeqaeRaRKqAEtElaEaserv r+++ + +++ E++a+ L+a l +L ++L++aeRaRKqA+ E +E++e+ mKIAA0866 1680 RDEIFATSKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELAEEL 1729 neLtaqnssLiaqKRKLEgelaalqsDLDEavnElkaAeERakKAqaDaa ++ + ++L+++KR+LE+++a+l+++L+E++ + +a +R++KA +a+ mKIAA0866 1730 ASSLSGRNTLQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAE 1779 rLaeELrqEQehsqklErlRKqLEsqvKeLqvRLdEaEaaAlkgGKkvIq +L EL+ E+++ qk+E+ R qLE+q+KeL +L+E+E a+ +++K +++ mKIAA0866 1780 QLSNELATERSTAQKNESARQQLERQNKELRSKLQEVEGAVKAKLKSTVA 1829 KLEaRVReLEaELdgEqRRhaetqKnlRKaeRrvKELqfQvEEDkKnler LEa+++ LE++ + E R+++ + K+l +++++KE+ QvE+++K+ e+ mKIAA0866 1830 ALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEVLLQVEDERKMAEQ 1879 lQDLvDKLqaKiKtyKRQlEEaEEiaqinlsKyRkaQreLEdAEERADqA +++ +K + K+K++KRQlEEaEE++q+ + Rk+QreL++A+E+++++ mKIAA0866 1880 YKEQAEKGNTKVKQLKRQLEEAEEESQRINANRRKLQRELDEATESNEAM 1929 EsslnklRqreaKsRr<-* +++n l+ +K Rr mKIAA0866 1930 GREVNALK---SKLRR 1942 LMP: domain 1 of 1, from 1777 to 1945: score -23.7, E = 0.45 *->nAntLlakLtDnDseIqk...aKteLe...kEIqkAnqavasnntaS +A +L++ L + s+ qk+++a+++Le+++kE ++ q+v+ +a mKIAA0866 1777 QAEQLSNELATERSTAQKnesARQQLErqnKELRSKLQEVEGAVKAK 1823 MqSAkssLdaKvteitkkLetFNkdKdAKFkELeqTRkdIdeFindnvkn ++S L+aK+++ +++ e+ ++K A k L+q k e + + + mKIAA0866 1824 LKSTVAALEAKIAQLEEQVEQEAREKQAATKSLKQKDKKLKEVLLQV-ED 1872 nPNYstLvkdLtsk.....kdsKnSVTnSsNKsdIeaAN.teLkqaLakA + ++ k+ +k++++ k K+ + s + AN+ L+ +L++A mKIAA0866 1873 ERKMAEQYKEQAEKgntkvKQLKRQLEEAEEESQRINANrRKLQRELDEA 1922 kaaKdqideaakSiKeqLndsIs<-* + + + +K L + mKIAA0866 1923 TESNEAMGREVNALKSKLRRGNE 1945 //