hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpf/mpf00136/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0857  ( 1353 res)   mpf00136

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
C2       Protein kinase C conserved region 2 (CalB)      37.7    1.6e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
C2         1/1      55   178 ..     1    92 []    37.7  1.6e-06

Alignments of top-scoring domains:
C2: domain 1 of 1, from 55 to 178: score 37.7, E = 1.6e-06
                   *->tLtvkiisArnLp..........DPYVkvs......kTkvvkktlsg
                       + v++++A +L++++++ ++++D Y +++ ++ +  T+vv+kt   
   mKIAA0857    55    HVQVTVLRASGLRgkssgagstsDAYTVIQvgrekySTSVVEKTQG- 100  

                   fNPvWnEesetFeFevpp..........................s.Leie
                    +P+W E   ++ Fe+pp+  ++  + ++ + ++ +  ++++   +L+++
   mKIAA0857   101 -CPEWCE---ECSFELPPgaldgllraqeadagpapwasgpnaaCeLVLT 146  

                   VyDk......dfiGrvtippnnahqhsadglihlsell.ggrh.kl<-*
                    ++++  + ++f+Gr+t+               l+e+ + gr ++    
   mKIAA0857   147 TMHRsligvdKFLGRATVA--------------LDEVFrAGRAqHT    178  

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