hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm12149/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0838  ( 609 res)   mpm12149

Scores for sequence family classification (score includes all domains):
Model       Description                                 Score    E-value  N 
--------    -----------                                 -----    ------- ---
Glutaminase Glutaminase                                 641.4   4.9e-189   1

Parsed for domains:
Model       Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------    ------- ----- -----    ----- -----      -----  -------
Glutaminase   1/1     255   541 ..     1   292 []   641.4 4.9e-189

Alignments of top-scoring domains:
Glutaminase: domain 1 of 1, from 255 to 541: score 641.4, E = 4.9e-189
                   *->GkvAdYIPaLakvdpdllGiavvtvDGqvysaGDadepFslQSISKV
                      GkvAdYIP+Lak++pdl+G++v+tvDGq++s+GD+++pF+lQS++K+
   mKIAA0838   255    GKVADYIPQLAKFSPDLWGVSVCTVDGQRHSIGDTKVPFCLQSCVKP 301  

                   ftlalalqdvGeeyvwqrVGkEPSGdpFNSivqLEtekpGkPrNPmINAG
                   + +a+a++d+G+eyv+++VGkEPSG++FN++++ E +k   P+NPm+NAG
   mKIAA0838   302 LKYAIAVNDLGTEYVHRYVGKEPSGLRFNKLFLNEDDK---PHNPMVNAG 348  

                   AIvVtsllkgrtsieerldflLsflrklaGneeitideeVaqSEreTadR
                   AIvVtsl+k++++++e++d++++fl+k+aGne+++++++++qSEre +dR
   mKIAA0838   349 AIVVTSLIKQGVNNAEKFDYVMQFLNKMAGNEYVGFSNATFQSERESGDR 398  

                   NrAlAylmkskGnlehdvelvaaLdlYfrqCalemsCedLAvagltLAng
                   N+A++y++k+k+++++++++v +Ld+Yf++C++e++Ce+ +v+++tLAng
   mKIAA0838   399 NFAIGYYLKEKKCFPEGTDMVGILDFYFQLCSIEVTCESASVMAATLANG 448  

                   GvnPitgerVvspdvarrikAlMlTCGmYdaSGdFAyrVGLPaKSGVgGG
                   G++PitgerV+sp+++r++++lM++CGmYd+SG+FA++VGLPaKSGV GG
   mKIAA0838   449 GFCPITGERVLSPEAVRNTLSLMHSCGMYDFSGQFAFHVGLPAKSGVAGG 498  

                   IlaVVPgpsvmgiavwSPaLDeaGNSvaGvaaLekLaqrtglsiF<-*
                   Il+VVP+  vmg+++wSP+LD++GNSv+G+++++ L+++++++++   
   mKIAA0838   499 ILLVVPN--VMGMMCWSPPLDKMGNSVKGIHFCHDLVSLCNFHNY    541  

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