hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mid/mid11048/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0836  ( 312 res)   mid11048

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
C5-epim_C D-glucuronyl C5-epimerase C-terminus          452.9   2.8e-132   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
C5-epim_C   1/1     111   302 ..     1   206 []   452.9 2.8e-132

Alignments of top-scoring domains:
C5-epim_C: domain 1 of 1, from 111 to 302: score 452.9, E = 2.8e-132
                   *->qdekrGGWrvpverplkegyknLspGWysAmaQGhgisvLaRAYelt
                      qdek GGW+++v+r+l+eg+k+L+pGWysAmaQG++is+L+RAY lt
   mKIAA0836   111    QDEK-GGWPIMVTRKLGEGFKSLEPGWYSAMAQGQAISTLVRAYLLT 156  

                   GGDEeYLksAakAinlfkvpsekGGVkatfmgKnKSYyWYeEYpttppsy
                   + D  +L sA +A++++k+pse++GVka+fm+K+   +WYeEYpttp+s+
   mKIAA0836   157 K-DYVFLSSALRATAPYKFPSEQHGVKAVFMNKH---DWYEEYPTTPSSF 202  

                   VLNGFiysllGLYDlsqLeLmiDenktTgnarikeAleLykeGlkSLKam
                   VLNGF+ysl+GLYDl         ++t+g++++keA++Ly++G++SLKam
   mKIAA0836   203 VLNGFMYSLIGLYDL---------KETAGETLGKEARSLYERGMESLKAM 243  

                   LplYDTGsWTyYDlrHlaLGvApNLArwdYHalHvnlLllLytitgDeiy
                   LplYDTGs+T+YDlrH++LG+ApNLArwdYH++H+n+L+lL+ti++++i+
   mKIAA0836   244 LPLYDTGSGTIYDLRHFMLGIAPNLARWDYHTTHINQLQLLSTIDESPIF 293  

                   kktaeRWks<-*
                   k++++RWks   
   mKIAA0836   294 KEFVKRWKS    302  

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