hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm11116/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0810  ( 920 res)   mpm11116

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
Sad1_UNC Sad1 / UNC-like C-terminal                     250.2    2.9e-71   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sad1_UNC   1/1     784   918 ..     1   147 []   250.2  2.9e-71

Alignments of top-scoring domains:
Sad1_UNC: domain 1 of 1, from 784 to 918: score 250.2, E = 2.9e-71
                   *->lnyeaksprvilqedkDkympgpCwsfkgsrGfvvieLsepIiveav
                      l+y+++sprv++q+d     pg+Cw+fkgs+G++v++Ls++I+++++
   mKIAA0810   784    LWYFSQSPRVVIQPD---IYPGNCWAFKGSQGYLVVRLSMKIYPTTF 827  

                   tLeHveksvspdGnfsSAPKdFeVsgserypdeesTeewvlLGeFtYdld
                   t+eH++k++sp+Gn+sSAPKdF+V+g+e++ +ee     + LG+FtYd++
   mKIAA0810   828 TMEHIPKTLSPTGNISSAPKDFAVYGLETEYQEE----GQPLGRFTYDQE 873  

                   gknlQtFqlqnpCpyiekqswvkyVklrilSNyGnehYTClYrfRVhGts
                   g +lQ+F+  ++ p+     ++++V+lr+lSN+G+++YTClYrfRVhG++
   mKIAA0810   874 GDSLQMFHTLER-PDQ----AFQIVELRVLSNWGHPEYTCLYRFRVHGEP 918  

                   <-*
                      
   mKIAA0810     -     -    

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