hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm03286/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0797  ( 1174 res)   mpm03286

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
Peptidase_C48 Ulp1 protease family, C-terminal cataly   266.1    4.8e-76   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
Peptidase_C48   1/1     728  1135 ..     1   245 []   266.1  4.8e-76

Alignments of top-scoring domains:
Peptidase_C48: domain 1 of 1, from 728 to 1135: score 266.1, E = 4.8e-76
                   *->isitmrdlktltkkewlnDtiidfylrylaerllpdPilkekftsal
                      is+t++dl++l+++e+lnD iidfyl+yl++++l+      k+ + +
   mKIAA0797   728    ISVTNEDLHCLSEGEFLNDVIIDFYLKYLVLEKLK------KEDADR 768  

                   thffnsFfytklksrfkwgde......kdelykdvkrgtargekkkkkdl
                   +h+f+sFfy++l++r +++ ++++ + +++++ +vk++t      +++d+
   mKIAA0797   769 IHIFSSFFYKRLNQRERRNPDttnlsiQQKRHGRVKTWT------RHVDI 812  

                   fdkDyiyvPinedgkksHWvllvIdlpdkkk...................
                   f+kD+i+vP+ne     HW+l+v++ p  +k++ +++++ +++   ++++
   mKIAA0797   813 FEKDFIFVPLNEAA---HWFLAVVCFPGLEKpkyepnphyhenavmqktp 859  

                   ..................................................
                   + +++  ++ ++ +  ++++  ++  ++  ++++    ++++  ++++++
   mKIAA0797   860 saedscvssasemgacsqnsaakpvikkmlnrkhclavtdssaaqeesep 909  

                   ..................................................
                     +++  + + + +++++  ++++++++++++ ++  ++++++++ +++ 
   mKIAA0797   910 cyrrnaysvkcsmkkknhaineneepsngestcqdicdrtqsenglrdec 959  

                   ..................................................
                    ++ ++++  ++ + + ++++ ++++  +++  + ++++++++++++++ 
   mKIAA0797   960 fssvhhpdalskirlnygdqsadggklledelidfsedqddpddssddgl 1009 

                   ...................kdqstivilDSlislntekavktitalarpl
                     +++ +++ ++ + +++ ++q++i  +DSl++++++++vk   +l+++l
   mKIAA0797  1010 ladenysseigqwhlkptvCKQPCILLMDSLRGPSRSNVVK---ILREYL 1056 

                   sdelpylkrerlslkksfdkkswdlqpfeikrltmkvPQQpngyDCGiyv
                   ++e++  k++    k+sf+k +++       +  +kvPQQ+n++DCG+yv
   mKIAA0797  1057 EVEWEVKKGS----KRSFSKDVMK-------GSNPKVPQQNNFSDCGVYV 1095 

                   lkfielfaegppqdfmttindk.klkdlksfrkklakeiyeel<-*
                   l+++e f+e+p+  f +   ++++ ++ +  r+k+++e+++ +   
   mKIAA0797  1096 LQYVESFFENPVLNFEL---PMnLVNWFPPPRMKTKREEIRNI    1135 

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