hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mfj/mfj41092/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0795  ( 588 res)   mfj41092

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
BTB      Broad-Complex, Tramtrack and Bric a brac       113.5    2.3e-29   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
BTB        1/1      52   149 ..     1   114 []   113.5  2.3e-29

Alignments of top-scoring domains:
BTB: domain 1 of 1, from 52 to 149: score 113.5, E = 2.3e-29
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                      cDvtl +g+         +kf+a  H+ vLaa+    pyF+a+f+++
   mKIAA0795    52    CDVTLKIGD---------HKFSA--HRIVLAAS---IPYFHAMFTNd 84   

                   ........ieldDeallievspeaFralLnflYt.kldlpeedvenveel
                     + ++++i +++      ++p+a++al+nf Y + l ++++   nv++l
   mKIAA0795    85 mmeckqdeIVMQG------MDPSALEALINFAYNgNLAIDQQ---NVQSL 125  

                   LelAdfldSYGqip.lvelCeefllknl<-*
                   L  A+fl    q+++++++C+ fl ++l   
   mKIAA0795   126 LMGASFL----QLQsIKDACCTFLRERL    149  

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