hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mie/mie09077/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0793  ( 186 res)   mie09077

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       Pleckstrin homology domain.                     72.4    5.8e-17   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      52   150 ..     1    82 []    72.4  5.8e-17

Alignments of top-scoring domains:
PH: domain 1 of 1, from 52 to 150: score 72.4, E = 5.8e-17
                   *->vikeGwLlkks..k.swkkryfvLfngvLlyyksk...kpkgsipLs
                       +++G+Ll+k +++++w+k ++v++n +L++yk ++++ p  s+pL 
   mKIAA0793    52    NQLSGYLLRKFknSnGWQKLWVVFTNFCLFFYKTHqddYPLASLPLL 98   

                   gcsvre.p.........cFeivt.drtlllqAeseeereeWvealqsaia
                   g+sv+ + + ++ +++ +F++ +++++++++Aes+ ++e+W++ +++a++
   mKIAA0793    99 GYSVSLpReadsihkdyVFKLQFkSHVYFFRAESKYTFERWIDVIKRASS 148  

                   ka<-*
                   +    
   mKIAA0793   149 SP    150  

//