hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna4/rodent/full/goal/mie/mie09077/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0793  ( 186 res)   mie09077

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PH       PH domain                                       67.8    2.2e-16   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PH         1/1      52   148 ..     1    92 []    67.8  2.2e-16

Alignments of top-scoring domains:
PH: domain 1 of 1, from 52 to 148: score 67.8, E = 2.2e-16
                   *->vikeGwLlkkg.gkkswkkRyfvLfndvLlyykdkk.kkpkgsipLs
                         +G+Ll+k +   +w+k ++v++n +L++yk  +++ p  s+pL 
   mKIAA0793    52    NQLSGYLLRKFkNSNGWQKLWVVFTNFCLFFYKTHQdDYPLASLPLL 98   

                   giqvekvpdn...krkncFeirt.dretlllqaeseeerkeWvkaiqsai
                   g++v  + + ++  ++++F++ ++++ +++++aes    ++W++ i++a+
   mKIAA0793    99 GYSVSLPREAdsiHKDYVFKLQFkSH-VYFFRAESKYTFERWIDVIKRAS 147  

                   r<-*
                   +   
   mKIAA0793   148 S    148  

//