hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mpm/mpm11105/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0786  ( 891 res)   mpm11105

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
GPS      G-protein-coupled receptor proteolytic site     98.9    5.8e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
GPS        1/1     259   311 ..     1    51 []    98.9  5.8e-25

Alignments of top-scoring domains:
GPS: domain 1 of 1, from 259 to 311: score 98.9, E = 5.8e-25
                   *->snpiCvfWdese...tgeWstrGCelvetnkpthttCsCnHLTsFAv
                      +n++C+fW++se++ +g+Wst+GC+lv+tnk t+ttC C+HLT+FA+
   mKIAA0786   259    FNANCSFWNYSErtmMGYWSTQGCKLVDTNK-TRTTCACSHLTNFAI 304  

                   Lmdvspn<-*
                   Lm+++++   
   mKIAA0786   305 LMAHREI    311  

//