hmmpfam - search a single seq against HMM database HMMER 2.1.1 (Dec 1998) Copyright (C) 1992-1998 Washington University School of Medicine HMMER is freely distributed under the GNU General Public License (GPL). - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /data11/genetics/InterProScan/iprscan/data/Pfam Sequence file: /cdna4/rodent/full/goal/mph/mph00577/w3open/interpro/cnk_1/seq.in - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query: mKIAA0778 ( 1022 res) mph00577 Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- E1-E2_ATPase E1-E2 ATPase 389.6 3e-113 1 Cation_ATPase_C Cation transporting ATPase, C-terminu 215.7 6.9e-61 1 Cation_ATPase_N Cation transporter/ATPase, N-terminus 128.5 1.2e-34 1 Hydrolase haloacid dehalogenase-like hydrolase 65.5 1.1e-15 1 Hydrolase_3 haloacid dehalogenase-like hydrolase -91.8 0.57 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- Cation_ATPase_N 1/1 44 127 .. 1 87 [] 128.5 1.2e-34 E1-E2_ATPase 1/1 146 377 .. 1 245 [] 389.6 3e-113 Hydrolase 1/1 381 748 .. 1 183 [] 65.5 1.1e-15 Hydrolase_3 1/1 530 772 .. 1 271 [] -91.8 0.57 Cation_ATPase_C 1/1 844 1011 .. 1 199 [] 215.7 6.9e-61 Alignments of top-scoring domains: Cation_ATPase_N: domain 1 of 1, from 44 to 127: score 128.5, E = 1.2e-34 *->eelkkevdldahkltvEevleklktdpeeGLsseeaaeRlkkyGpNe +elkkev++d+hkl+++e+ +k+++d+++GL+ + a++ l+++GpN+ mKIAA0778 44 DELKKEVAMDDHKLSLDELGRKYQVDLSKGLTNQRAQDILARDGPNA 90 LppekktslwlkfLeQFkdplvllLlaAAiiSALdfvlgg<-* L+p+++t++w+kf++Q+++++++lL+++A+++ f+++g mKIAA0778 91 LTPPPTTPEWVKFCRQLFGGFSILLWIGALLC---FLAYG 127 E1-E2_ATPase: domain 1 of 1, from 146 to 377: score 389.6, E = 3e-113 *->villivllnatlefyqesrAekAleaLkklvpptAtVlRdGgkeeei v++++v++++++++yqe++++k+++++k++vp++A V+R+G + +i mKIAA0778 146 VLAAVVIVTGCFSYYQEAKSSKIMDSFKNMVPQQALVIREG-EKMQI 191 paeeLvpGDiVevkpGdrVPADgrvvegestLkVDESaLTGESlPVeKhs +aee+v+GD+Vevk GdrVPAD+r++++++ +kVD+S+LTGES+P+++ s mKIAA0778 192 NAEEVVVGDLVEVKGGDRVPADLRIISSHG-CKVDNSSLTGESEPQTR-S 239 dvvtpdnplergnmVfaGTlvvsGsltgvVtatGddTflgkIakLVeeAq +++t++nple++n++f++T++v+G+++g+V+atGd+T++g+Ia+L ++ + mKIAA0778 240 PEFTHENPLETRNICFFSTNCVEGTARGIVIATGDRTVMGRIATLASGLE 289 ssktPlQrlldkfgkiltpvililavlvfiiwllrnfnaafggswlegll ++tP+ ++++f + +t v+++l+v +f++ l++ g+swle mKIAA0778 290 VGQTPIAMEIEHFIQLITGVAVFLGVSFFVLSLIL------GYSWLE--- 330 yalifavallVaAcPegLplvvtvalalGtgrmAkkgaLVKglpAvEt<- a+if+++++Va++PegL ++vtv+l+l+++rmA+k++LVK+l+AvEt mKIAA0778 331 -AVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVET 377 * mKIAA0778 - - Hydrolase: domain 1 of 1, from 381 to 748: score 65.5, E = 1.1e-15 *->ikavvFDkDGTLtdgkeppiaeaiveaaaelgl.............. + +++ Dk+GTLt+ + ++ + ++ e+ ++++++ + +++++ mKIAA0778 381 TSTICSDKTGTLTQNRMTVAHMWFDNQIHEADTtedqsgatfdkrsp 427 ..lpleevekllgrgl.g...erilleggltaell............... + ++l ++ l r++ ++e+i + ++ta +++++ + + + ++ mKIAA0778 428 twTALSRIAGLCNRAVfKagqENISVSKRDTAGDAsesallkcielscgs 477 .................................................. ++ ++++++ + + +++++ + +++++++ ++ ++ +++ ++ mKIAA0778 478 vrkmrdrnpkvaeipfnstnkyqlsiheredspqshvlvmkgaperildr 527 .................................................. ++ +++ + +++ + + + ++ +++ + + ++++ ++ mKIAA0778 528 cstilvqgkeipldkemqdafqnaymelgglgervlgfcqlnlpsgkfpr 577 ..............d.evlglial.dklypgarealkaLkerGikvailT + + ++++ + +++ +++gl d+++ +++a+ +++++Gikv+++T mKIAA0778 578 gfkfdtdelnfpteKlCFVGLMSMiDPPRAAVPDAVGKCRSAGIKVIMVT 627 ggdr.naeallealgla.lfdvivdsddvggvgpivvgKPkpeifllale g+++ +a+a +a+ +++i + ++ + ++ mKIAA0778 628 GDHPiTAKA------IAkGVGIISEGNETV---------------EDIAA 656 rlgvkpeevg........................................ rl++++++v++++ + ++++ ++ ++++ ++ +++++ +++++ mKIAA0778 657 RLNIPVSQVNpreakacvvhgsdlkdmtseqldeilrdhteivfartspq 706 ............pe.vlmvGDgvnDapalaaAGvgvamgngg<-* ++ ++ ++++ v++ GDgvnD pal++A++g+amg +g mKIAA0778 707 qkliivegcqrqGAiVAVTGDGVNDSPALKKADIGIAMGISG 748 Hydrolase_3: domain 1 of 1, from 530 to 772: score -91.8, E = 0.57 *->iasDlDGTLLnsdkkis..ektkeAikklqe.........kG.ikvv T+L ++k+i+ +++ ++A++ + + ++ +++ G +++ mKIAA0778 530 -------TILVQGKEIPldKEMQDAFQNAYMelgglgervLGfCQLN 569 iATGRpyrgalpvleeLgldkmqlpvIcgYyNGAlityddengkilyknp + +G +rg + +eL++ + c ++ ++++ mKIAA0778 570 LPSGKFPRGFKFDTDELNFP---TEKLC------FV-------GLMSMID 603 idkedvkeiieylkelnlsillytddgiyvlnd...kevsekiereenkv ++++v + + ++++ ++ ++++t+d+ ++ ++ + ++ +e + mKIAA0778 604 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAiakGVGIISEGNETVED 653 ksfvlviddfeelededinKillfi.viv.dpedldellekelkelfgkl +l+i + ++++e + ++++++ + + e+lde+ + e mKIAA0778 654 IAARLNIPVSQVNPREAKACVVHGSdLKDmTSEQLDEI-LRDHTEI---- 698 ievtitssgpgylEImpkgvsKgtalkaLakhlgidleeviAFGDgeNDi + +++p I+ g++ a+ a+ GDg ND mKIAA0778 699 ---VFARTSPQQKLIIVEGCQRQGAIVAVT-------------GDGVNDS 732 eMLelaGlgVAMg.NAspevKaaAdyEvtgsNneedGVAkal<-* + L+ a++g+AMg +s+ K+aAd+ + + n + mKIAA0778 733 PALKKADIGIAMGiSGSDVSKQAADM-ILLDDNF-ASIVTGV 772 Cation_ATPase_C: domain 1 of 1, from 844 to 1011: score 215.7, E = 6.9e-61 *->RpPRnpkkDeliftgllffrylviGvivavatlaaFvwwfygggenG R+PRn + D+l++++l++++y +iG+i+a+++ F+++f++ +enG mKIAA0778 844 RQPRNSQTDKLVNERLISMAYGQIGMIQALGG---FFTYFVILAENG 887 edfgPhllygqlshwescgandltdsfkgqewCeifrkglearaqTmaFt f+P+ l+g++ +w++ + ndl+ds+ gqew++++rk e++++T++F+ mKIAA0778 888 --FLPSRLLGIRLDWDDRTTNDLEDSY-GQEWTYEQRKVVEFTCHTAFFA 934 vlVviqmfNAWEalncrsefFmhpldrnSlfqmgpgLfrNkwLllAvvls ++Vv+q+++ +++c+++ rnS+fq+g ++Nk+L+++++ + mKIAA0778 935 SIVVVQWAD---LIICKTR-------RNSVFQQG---MKNKILIFGLLEE 971 lalqllivYvPglqtiFgthpllslqeWlvvigfsflvfildElrKfikR +al++++ Y+Pg+ +++ +++ + +l+fi+dE+rK+i R mKIAA0778 972 TALAAFLSYCPGMGVALR-MYP-----------LNLLIFIYDEVRKLILR 1009 rr<-* r+ mKIAA0778 1010 RY 1011 //