hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna4/rodent/full/goal/mbg/mbg09833/w3open/interpro/cnk_1/seq.in
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Query:  mKIAA0777  ( 1134 res)   mbg09833

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SH3      Src homology 3 domains                         224.7    8.1e-63   3
Sorb     Sorbin homologous domain                       126.6    2.7e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
Sorb       1/1       6    56 ..     1    55 []   126.6  2.7e-33
SH3        1/3     900   955 ..     1    58 []    91.7  8.6e-23
SH3        2/3     975  1032 ..     1    58 []    78.8  6.5e-19
SH3        3/3    1078  1134 .]     1    58 []    56.2  4.3e-12

Alignments of top-scoring domains:
Sorb: domain 1 of 1, from 6 to 56: score 126.6, E = 2.7e-33
                   *->vrnvdypgivpvDEsGIPlasPrSsveRpkDmSQWYrtMFKQIHrkg
                      +++++ypgi+pvDEsGIP+a+ r++v+RpkD   WY+tMFKQIH+++
   mKIAA0777     6    IKAPHYPGIGPVDESGIPTAI-RTTVDRPKD---WYKTMFKQIHMVH 48   

                   kpDddnDv<-*
                   kpD+d+D+   
   mKIAA0777    49 KPDEDTDM    56   

SH3: domain 1 of 3, from 900 to 955: score 91.7, E = 8.6e-23
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                        ++A+YD++aq++ ELsFkkGD++++l+k+d++W+eGe++  G++G
   mKIAA0777   900    LPAKAVYDFKAQTSKELSFKKGDTVYILRKIDQNWYEGEHH--GRVG 944  

                   lfPsnYVeeie<-*
                   +fP +YVe+++   
   mKIAA0777   945 IFPISYVEKLT    955  

SH3: domain 2 of 3, from 975 to 1032: score 78.8, E = 6.5e-19
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      ++++A+Y+++a++  ELs++kGD i++l+++d++W+eG++ +t+++G
   mKIAA0777   975    GEAIAKYNFNADTNVELSLRKGDRIILLKRVDQNWYEGKIPGTNRQG 1021 

                   lfPsnYVeeie<-*
                   +fP +YVe+++   
   mKIAA0777  1022 IFPVSYVEVVK    1032 

SH3: domain 3 of 3, from 1078 to 1134: score 56.2, E = 4.3e-12
                   *->eyvvAlYDyeaqnedELsFkkGDiitvleksddgWweGelnrtGkeG
                      e ++AlY+y+++nedEL +++ D++ v ek+ddgW+ G+ +rt   G
   mKIAA0777  1078    EPFQALYNYTPRNEDELELRESDVVDVMEKCDDGWFVGTSRRTKFFG 1124 

                   lfPsnYVeeie<-*
                    fP+nYV +     
   mKIAA0777  1125 TFPGNYV-KRL    1134 

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